Pediococcus inopinatus: PI20285_02675
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Entry
PI20285_02675 CDS
T05337
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pio
Pediococcus inopinatus
Pathway
pio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PI20285_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pio03021
]
PI20285_02675
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_02675
Enzymes [BR:
pio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PI20285_02675
Transcription machinery [BR:
pio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PI20285_02675
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PI20285_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AVK99637
UniProt:
A0A0R2IFS6
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All DBs
Position
524847..525791
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHKIDENINYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDGVL
HEFSTIEGVVEDVTQIILNIKKVSLKIESDDEKSLEIDVKGPATVTAGDIQGDSDVEILN
PDQYICTVADGVTFHAILTADTGRGYVSADENKARKDDMPIGVLPIDSIYTPIERVNYQV
ENTRVGQRDDYDKLTLDVWTDGSISPSEATSLSAKILTEHLALFVNLTDEAKDAEIMVEK
EETHKEKMLEMSIEELDLSVRSYNCLKRAGINTVQELTDKTEAQMMKVRNFGRKSLEEVK
VKLTDLGLSLRNED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaaaccaaacattcataaaattgatgagaatatcaattacggcaag
tttgtcgttgaaccgctcgaacgtgggtacggaacaacattaggcaattctttgcgtcgt
attttgttgtcatcattaccgggtgcggcggttacaagcattcaaattgatggcgttctt
catgagttttcaacaattgaaggcgtagttgaagatgtcacacaaatcatcttaaacatt
aaaaaggtttctttaaagatcgaaagtgatgatgaaaaatctttagagattgatgttaag
ggtcctgctaccgtcactgctggtgacattcaaggtgacagtgatgttgagattcttaat
ccagatcagtatatctgtaccgttgctgatggcgtgacttttcatgctatattgacagct
gatacgggtcgtggttatgtttcagctgatgaaaataaggctcgcaaggatgatatgcca
attggtgtgcttccaatcgattccatttataccccaatcgagcgtgtcaattatcaagtt
gagaacacacgtgttggtcaacgggatgactatgataagcttactttggatgtttggacc
gatggttccattagtcctagtgaggctactagtctttcagcaaaaattcttactgaacat
ttggctctatttgttaatttaacagatgaagctaaagatgctgaaatcatggtcgaaaag
gaagaaacacataaagaaaaaatgttagagatgtccatcgaagagcttgatttgtcagtt
cgttcatacaattgtttgaaacgtgctggaatcaatactgttcaggaattaactgacaaa
actgaagcacaaatgatgaaagttagaaactttgggcgtaaatcccttgaagaggttaaa
gttaaattaactgaccttggactttcattacgcaatgaagactaa
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