KEGG   Pirellula sp. SH-Sr6A: VN12_04930Help
Entry
VN12_04930        CDS       T04360                                 

Gene name
nedA_1
Definition
(GenBank) Sialidase precursor
  KO
K01186  sialidase-1 [EC:3.2.1.18]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir00511  Other glycan degradation
pir00600  Sphingolipid metabolism
Brite
KEGG Orthology (KO) [BR:pir00001]
 Metabolism
  Lipid metabolism
   00600 Sphingolipid metabolism
    VN12_04930 (nedA_1)
  Glycan biosynthesis and metabolism
   00511 Other glycan degradation
    VN12_04930 (nedA_1)
Enzymes [BR:pir01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.18  exo-alpha-sialidase
     VN12_04930 (nedA_1)
Bacterial toxins [BR:pir02042]
 Toxins that damage the extracellular matrix
  Hyaluronidases/Collagenases
   VN12_04930 (nedA_1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: BNR_2 BNR BNR_3 Sortilin-Vps10
Motif
Other DBs
NCBI-ProteinID: AMV31440
UniProt: A0A142XY55
LinkDB All DBs
Position
complement(1220560..1221741)
Genome map
AA seq 393 aa AA seqDB search
MNAVGLAWWVAHAAAAGLFLIASAAAPPEEFDVFIPEQDGFASIRIPALVVSKQGTLLAF
AEGRAADADQAKNKIILKRSSDGGKSWCACAVIAADGDNALNNPCAVVEQKTGAILLMYQ
SYPAGLAERSGQILSGYEGKAIVRNWLITSDDDGVTWSTPRDLTRSTKREQRVTTIAGGP
GVGIQLARGPHVGRILFPFNEGPFGAWNIYAVYSDDRGATWKMGAIAPNGILTTQDGKKT
SIVNEAQFVELDDGSVRFNVRRWAGKPVRKTAVSHDGGETWSDVEDAVDLIDPGCMGSII
RYEQPGAPKTSRLLYSGPQSQGRGHGTVSISYDNGKTWPLKMVIQPGPFAYSSMAQLPDG
SIGCLYEADGTKRVALIRFEMDWLETPSVSAEK
NT seq 1182 nt NT seq  +upstreamnt  +downstreamnt
atgaatgcggtaggactcgcttggtgggtggctcatgcagctgccgcggggttgtttctg
atcgcgagtgcggcagcaccacccgaagagttcgatgttttcatacccgagcaggacggt
tttgcttcgatccggattcctgcgttggtggtttccaaacaaggtacgctgcttgccttt
gcagaaggccgcgcggcggacgccgatcaagctaaaaacaaaattatcttgaaaaggagt
tccgacggtgggaagtcgtggtgcgcctgcgcggtcattgctgcggatggggacaatgcg
ttaaacaatccgtgcgcggtggtggagcagaaaaccggtgcgattctgcttatgtatcag
tcttatcccgcaggtttggccgagcggagcggacagatcttgtccggctacgaagggaag
gccatcgtccgaaactggttgatcaccagcgacgacgacggagtgacttggagcacgccc
cgcgatctgacgcgtagtaccaagagagagcaacgggtcaccacgatcgcgggaggacct
ggagttggaatccaactagctcgagggcctcacgttggaagaattcttttccctttcaac
gagggaccatttggcgcttggaatatctacgctgtttacagcgacgatcgcggtgcgact
tggaaaatgggagcgattgctccaaacggaattctcacgacccaagatggaaaaaagacg
agcattgtcaatgaggctcaatttgtagaattggacgatgggtcggtccgtttcaatgta
cgtagatgggccgggaagcccgttcgcaaaacggcggtcagccacgatggaggagaaact
tggtctgatgtggaagacgcggtggacttgatcgatcccggctgtatgggatcgatcatt
cgctatgagcagcctggtgcaccgaagaccagcaggcttctctattccggccctcagagt
caaggacgcggtcatggaactgtgtcgattagctacgacaacggaaagacgtggccgctt
aaaatggtcatccagccaggcccgtttgcgtattcctctatggcccagcttccggacgga
tcgattggatgtctctatgaggccgatggaacgaagcgagttgctttgatccgttttgaa
atggactggctagaaaccccgtcggtctcggccgaaaaatag

DBGET integrated database retrieval system