Pirellula sp. SH-Sr6A: VN12_07340
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Entry
VN12_07340 CDS
T04360
Symbol
purD
Name
(GenBank) Phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00230
Purine metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
Module
pir_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VN12_07340 (purD)
Enzymes [BR:
pir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
VN12_07340 (purD)
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Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
malic
KTSC
Motif
Other DBs
NCBI-ProteinID:
AMV31918
UniProt:
A0A142XY51
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Position
1754361..1755677
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AA seq
438 aa
AA seq
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MRVLVVGSGGREHALAWKISQSPRVTRLWVAPGNAGTALEAENVPIAADDIAGLVAFAKK
ESVDLVVVGPEVPLTLGLVDELAKVKIRAFGPSKAAAQLEGSKVFCKLLLRQADVPTADY
QAFRDADSAMRYIKARYPNERDKASVVIKADGLASGKGVIVCSYRDEALEAIDRIGRKNE
FGRAGSQMIIEERLEGPEASVLAITDGKTILTLPSAQDHKAAYDGDKGPNTGGMGAYSPT
PVVSDDLFETIEDKILVPTIHTMKRNRKPFRGVLYAGLMLTQAGPKVLEYNVRFGDPECQ
PLLMRLQSDLLDILEATVDGRLDEIDPPVWDPRPAICVVVASQGYPGAYENGRPITGLEK
AADLPDVKVFHAGTKLVDGTVVTNGGRVLGVTALGANLSAAKLNAYTAVQAVRWPGAWCR
KDISDKAAAYLAASATES
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagagttttggtcgtcgggagtggtggtcgggaacacgccttggcttggaaaatcagc
caaagtccacgcgtcacccgcctttgggtcgcccccggaaacgcaggtacggctttggag
gccgaaaacgttcccatcgccgcggatgatattgccggcctggtcgccttcgccaaaaaa
gaaagtgtggacttggtcgtggtcggccccgaagtccccctcaccctcggcttggtcgac
gagttggccaaggtcaagatccgagccttcggtccgagcaaggccgctgcccaactcgaa
ggaagcaaagtcttctgcaaactcttgctgcgacaagcggacgttccgaccgcggactat
caagcgtttcgggatgccgacagcgccatgcgctacatcaaagcccgctatcccaacgaa
cgagacaaagcttccgtcgtgatcaaagcggatggtctggccagcggaaaaggggtcatc
gtctgctcctatcgcgatgaagccctggaagccatcgaccgcatcggacgaaagaatgaa
ttcggacgggctggctcgcagatgatcatcgaggagcggctcgaaggacctgaggccagc
gtgctggcgatcaccgacgggaaaacgattctcaccctgcccagcgcccaggatcacaag
gctgcttacgatggagacaagggtcccaacacaggtggcatgggagcttactcgcccacc
cctgtcgtcagcgacgatttgttcgaaacgatcgaagacaagattctcgtaccgaccatc
catacgatgaaacggaatcgcaagccgtttcgtggggtcctttacgccggtctgatgttg
acccaggcaggaccgaaagtgctggagtacaacgtgcgattcggagaccccgaatgccag
ccgctcctgatgcggctccagagcgacttgctcgatatcctcgaagcaaccgtcgatggt
cgattggacgagatcgatccccccgtatgggacccccgtcctgcgatttgcgtcgtcgtc
gccagccaaggctatcctggagcctacgaaaatggccgacctattaccggtctagagaag
gcagctgaccttcccgatgtgaaggttttccacgcgggaaccaagctcgtggacggtacc
gtggtaaccaatggcggacgcgtgctgggcgtgaccgctttgggcgcgaatctatcggca
gctaaactcaatgcctacaccgcggttcaagccgttcgctggcccggcgcctggtgtcgc
aaagatatcagcgacaaagcggccgcctacttggcagcctccgctaccgagagctag
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