Paenibacillus sp. JDR-2: Pjdr2_2124
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Entry
Pjdr2_2124 CDS
T00977
Name
(GenBank) ABC transporter related
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd01501
beta-Lactam resistance
pjd02010
ABC transporters
Module
pjd_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_2124
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pjdr2_2124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_2124
01504 Antimicrobial resistance genes [BR:
pjd01504
]
Pjdr2_2124
Enzymes [BR:
pjd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
Pjdr2_2124
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pjdr2_2124
Antimicrobial resistance genes [BR:
pjd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
Pjdr2_2124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_30
AAA_23
AAA_29
AAA_22
RsgA_GTPase
SRP54
AAA_28
GutM
Motif
Other DBs
NCBI-ProteinID:
ACT00781
LinkDB
All DBs
Position
2504582..2506342
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AA seq
586 aa
AA seq
DB search
MRQEEKRRKGGGNWRPFLKLMMDTKPSKWLLGIAIGLSVISTVVGLAVPLLTKNVVDSFS
ITDISTMQIIGLCLAFLGQAAASGVSIYLLNRVGQNVVASLRDRLWKKLLVLTVPYFDKH
RTGDTVSRVINDTGIVKGLITEHLTGFFNGLISIIGAVSILLFLDWKMTLLMLTAVPVAM
LIFIPVGRKMTKISRELQDETAAFTTVLDQALSEIRLVKASNAEDYEYNNGKRSIVKLLG
LGIREGKLQAVIFPIIGLVMMGMLVLIIAYGGMRVSSGELSAGDLVAFILYLIQIVFPIN
QISQFFTQMQKAIGATERIISTLHSDEEPLRQGRPLLDARQPIVVDDVTFAYGEQDDVLR
HIDFTLQPGTVTAIVGPSGGGKTTLFSLLERFYQPQQGTVRIGQEDIFALSLHDWRSKIG
YVSQESPIIAGTIRDNLTYGTGRTITDDEMKLATKMAYADVFIDELPGRYETQVGERGIK
LSGGQRQRIAIARAILRDPQILMLDEATSSLDSKSEIVVQRALDNLMVGRTTLVIAHRLS
TVVDADQILFVEKGTITGRGTHEQLLQSHELYREFANQQLRLEKIS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagacaagaagagaagaggcgcaaaggcggagggaattggcgtccgtttctgaagctg
atgatggacaccaaaccttcgaaatggctgctcggcattgcgataggattaagcgtcata
tctaccgttgttgggctggcggtaccgttattaacgaaaaatgtagtggacagcttttcc
attaccgatataagtactatgcagattattgggctatgcttggcttttcttgggcaggcc
gcggcttccggggtatccatctatttgctgaaccgcgtcggtcaaaacgttgttgcaagc
ctgcgcgaccggttatggaagaagctgctggtattaaccgtgccttatttcgataagcac
cggacaggggatacggtaagccgggtaatcaatgatactgggatcgtcaaaggattgatt
acggagcatttgaccggattttttaacggattgatttctatcattggcgcggtatcgatc
cttctgttcctggattggaaaatgacgctgctaatgctgaccgccgtgccggttgcgatg
ctgatatttattcctgtaggccggaagatgacgaaaatttcaagagagcttcaggatgag
acggcggcctttacgacggtgcttgatcaagcgttgtcggaaatccgattagtaaaagca
tcaaatgcagaagactatgaatataacaacggcaagcgttccattgtgaaactgcttggt
ctcggcattcgggaagggaagctgcaggcggttattttcccgattatcggcctggtcatg
atggggatgcttgttctgattatcgcttacggcggaatgcgcgtatcgtcaggggagctg
tcggccggcgatttggtcgcttttattctatatttgatccagatcgtgttcccgattaac
cagatttcgcaatttttcacgcaaatgcagaaggcaatcggggcgacggagcgtattatc
tctaccctgcattcggatgaagagcctttgcgccaaggacgccccttgcttgatgcaagg
cagccaattgtggtcgatgatgtcacgtttgcttatggcgagcaggatgatgttctccgt
catattgattttacgcttcagccgggtacggtgacggcgattgttggcccaagcggcggc
gggaaaacaaccctgttctcgcttcttgaacggttttatcaaccgcagcaaggaacggtc
cgtattgggcaggaagatatctttgctctttccctgcatgattggcgcagcaagattggc
tatgtatcgcaggaaagtccgattattgccgggacgatccgggataatctgacttatggc
acgggcaggacaataaccgatgatgaaatgaagctggctacgaaaatggcgtatgcggac
gtctttattgatgagcttccgggccggtatgagacgcaggttggcgagcgaggcattaag
ctgtccggcgggcagcgccagcggattgcaatcgcaagggcaatcctgcgcgatcctcaa
attctgatgttggatgaggccacttcaagcttggacagcaaatcggagattgtcgtgcag
agggctctcgacaatctgatggttggacgtacaacgctggttattgcgcatcgtttgtca
acggtagtagatgccgatcagattttatttgtcgagaagggaacgattacgggaagaggc
acgcatgagcagctgctgcaatcccatgagctgtatcgtgaatttgccaaccagcaatta
cgtctagagaaaatctcataa
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