Paenibacillus sp. JDR-2: Pjdr2_3963
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Entry
Pjdr2_3963 CDS
T00977
Name
(GenBank) ABC transporter related
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_3963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_3963
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pjdr2_3963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
T2SSE
MobB
AAA_33
DUF87
MMR_HSR1
Zeta_toxin
AAA_22
AAA_23
NB-ARC
AAA_29
cobW
AAA_14
nSTAND3
AAA_16
G-alpha
TsaE
Septin
AAA_7
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACT02593
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All DBs
Position
complement(4508417..4510171)
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AA seq
584 aa
AA seq
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MKSEGVLKPYFRQTWHIYLGSFTLHAAASIVFAYFPKVLGDFTDKLKGGELGSQDVAHFS
LMLVLIGAGYALLGGYGQYLVMYVGRLFEYMTRRRLFTHFSGLSEHYYSKNGVGKMLNYF
MNDVTGVRESISMGINQTAMASMLLVSCVGAMILSDIPLYLIAASVGPLIFIPWIVIRIG
PVIRQRSRKVQEALGTMTESAEEQFGGIRVTKKFAVEPIMIKRFGNKVDQIKTNQLSLVR
ISSLFQATVPFLGNLSLIVSLAYGGYLTIKGDISLGNFVALTLYVRMLMNPLQQIGNVIN
TVQRSRASLQRLNELIAVQPDIVETDKATTINLSASPIRMENLTFTYPGASQPSLEHIDL
VIQPGMTLGIVGRTGSGKTTLVKQLLRVYDPPADAIHIGSEDIREVTLESLRTQIAYVPQ
DGFLFSTTVGENIAFARRQAGQGEIHTAAKQARIYENIAEFPEGFETKLGERGVTLSGGQ
RQRTSLARGFIMQAPLMILDDSVSAVDAVTESEIVHTIQQERQGKTTIIIAHRLSALKHA
DLIIVLDEGKIVQRGKHEELLAEPGPYAELHAIQEEGSQYADSR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcagaaggtgtattaaaaccgtatttcagacagacctggcatatttatctcgga
tcgtttacccttcatgcggcagccagtatcgtcttcgcttattttccgaaggtgcttggg
gattttacggataagttgaagggcggagagcttggctcccaggatgttgcgcatttcagc
ttgatgcttgttctgattggagcgggttatgccttgctggggggatacggtcaatacctg
gtcatgtatgtcggacggttgttcgaatacatgacccgtcgtcgtctatttactcatttt
tccggtcttagcgagcactactactcgaagaacggcgtcggcaaaatgctgaactacttc
atgaacgacgtaaccggcgtccgggaatccatctccatgggcattaaccagacggctatg
gcctccatgctgctcgtctcctgcgtaggggcgatgattcttagcgatattccgctctat
cttatcgctgcttccgttggacctctgatctttatcccttggattgtcatcaggattggt
ccggttatccgtcagcgttcccgcaaagtgcaggaggcgcttggcacgatgacggagtcc
gcggaggagcagttcggcggcatccgcgtgacgaagaagtttgcagtggagcctattatg
attaagcggtttggcaacaaggtcgatcagatcaagaccaaccagctgtcgctggtacgg
atcagctcgctgttccaggcaacggtgcctttcctcggcaacctgtctcttatcgtatct
ctggcttacggcggttatttaacgatcaaaggcgatatatcgcttggtaatttcgtcgcg
ttaacgctgtacgtacggatgctgatgaatccgctgcagcaaattggcaacgttatcaat
acggttcagcggtcgcgcgcatccttgcagcggcttaacgaattaatcgcggttcagccg
gatattgtggagaccgataaggcgacaacgattaatctttccgcaagtccgattcgcatg
gagaatttaacgtttacttatcccggtgcttcacaaccttcgctggagcatattgatctt
gttatacagcccggaatgacgcttggcattgtagggcgtacgggcagcggcaaaacaacg
ctcgtcaagcagctgctccgggtgtacgatccgccggccgatgccattcatatcggatcc
gaagacatacgggaggtcacgcttgagagcctgcgcacgcagattgcttacgtaccgcag
gacggcttcctgttcagcacaacggtcggcgagaatattgcctttgcacggcggcaggcc
ggccagggagagattcatacggcggccaagcaggcgcggatttacgagaatattgccgag
ttccccgaaggcttcgagacgaagctgggagaaaggggcgtcacgctatccggagggcag
cgtcagcgaacaagtctggcgcgcggctttatcatgcaggcacctcttatgatcctggat
gacagcgtcagcgccgtagatgcggtgaccgaatcggagattgtgcacacgatccagcag
gagcgtcaagggaaaacaaccattattatcgcgcatcggctcagcgctttaaagcatgcg
gatctcatcatcgtattggatgaagggaagatcgttcagcggggcaagcatgaggagctg
cttgcggaacctggaccttatgccgagctccatgcgattcaagaggagggaagccaatat
gccgacagccgttaa
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