Paenibacillus sp. JDR-2: Pjdr2_5796
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Entry
Pjdr2_5796 CDS
T00977
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_5796
Enzymes [BR:
pjd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pjdr2_5796
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pjdr2_5796
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Ta0938
Mre11_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
ACT04402
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All DBs
Position
complement(6648421..6649572)
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AA seq
383 aa
AA seq
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MRYVIGRPKRAIRRPGSRWLAAVCWTAFGIGIVMSISVLLATSAYRSAESSSAGSDRFQG
ESSGVTSSNKASADGFGQAPLPSPSGKPNSAASSKETYITVYLTKEQRTERVTLETYVRG
VVAGEMPADFGLEALKAQAIAARTYIVRRIELDDHSGMPATGAASRADVTDTIDHQIYIS
IDKLKELWPKGEQESRMAKLNKAVSETRGEVITYEGEPIQAVFFSTSNGYTENSEQYFQE
ELPYLRSVASPWDKQLSPRYQETVKLQLSDFNARLGLASKKKPVIRVLDKTEGNRIADIL
IDGKTYTGREVREKLGLASSEFTWKLDGDEIDITTFGYGHGVGMSQWGANGMAEEGKSAE
QIVTYYYTGTKVEQASKLAAKFR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagatacgtaataggcagaccgaaacgggcgatcaggcgtcccggcagcaggtggtta
gccgctgtatgctggacagccttcggaattggaatagtgatgagtatttctgtactgctg
gcgacttccgcataccggagcgccgaatcaagcagtgccggatctgatcggttccagggg
gagagcagcggcgtaacgtctagcaataaggcgtctgccgacgggttcgggcaggcgcct
ttgccgtctccatccggaaagccgaactcggcggcaagcagcaaggaaacgtatattacg
gtctatttaacaaaggagcaacgtacggagcgggttacgctggagacctatgtcagaggc
gtagttgcgggggaaatgcccgccgattttggtcttgaggcgttaaaggcccaggctatc
gccgcacgtacttatatagtgagaaggattgagcttgatgatcatagcggcatgccggca
accggtgcggcgtcccgggccgatgtcaccgatacgattgatcatcaaatctatatttcg
atcgataagctaaaggagctttggccaaagggtgaacaggagtcgagaatggcgaagctg
aacaaagccgtaagcgagactcgcggggaagtgattacctatgaaggcgaaccgattcag
gcggtatttttctccacgagcaacgggtatacggaaaactcggagcaatactttcaggag
gagcttccctatcttcgaagcgtagcaagcccttgggacaaacagctttcgccccgctat
caggagacggtgaagctgcaactctctgattttaatgcaagactagggctggccagcaag
aaaaagccggttatacgggtgctggataaaacagagggaaaccgaattgccgatattctg
atagacggcaagacgtacaccggacgggaagtgcgggagaagcttggacttgcttcctca
gaatttacatggaagctggatggggacgagattgatataacgacctttggctacggtcat
ggagtgggcatgagccaatggggagccaacggcatggcggaagaagggaaaagcgccgag
caaatcgtaacctactattatacgggcacaaaagtcgaacaagcttcgaagcttgcagcg
aaatttcgttaa
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