Paenibacillus kribbensis: B4V02_02530
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Entry
B4V02_02530 CDS
T05249
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B4V02_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_02530
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B4V02_02530
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B4V02_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
AAA_25
AAA_22
AAA_21
nSTAND3
AAA_33
DnaJ_CXXCXGXG
ATPase
AAA_24
NACHT
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ASR45664
UniProt:
A0A222WI52
LinkDB
All DBs
Position
570803..573664
Genome browser
AA seq
953 aa
AA seq
DB search
MANESIIIKGARAHNLKNIDVTIPRDKFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTNRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPEHGIEITSQTVEQMVDRIMQYPEKTRLQILAPLVSGRKGEHKTLFADIAKQGFVRVR
VNGELRELSEKIELEKNKKHSIEVVVDRIVVKEDVRARLSDSIETALKLSGGQLLVDIMG
QEELRFSSNFACPICGFSIDELTPRMFSFNNPFGACPDCDGLGAKMVVDPDLLIPDPQKS
VEEGAFQAWSGGTSTYYPQFLQSVCEHFGIPQDVPVSQLTTEQMNIILHGTADQKIRFRY
ENDFGQRKEAYVTFEGIIPNLERRYRDTASDGIREFIEGFMSAKPCNTCKGHRLKKESLA
VTIQEQNIAYVTDLSITEAAHFFQTLELSEKEKSIANLILKEINSRLGFLVNVGLEYLTL
SRSAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISALEHMRNLGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGMIMSQGTPQEVMEDPNSLTGQYLSGRKFIPV
NTERRKPADKWLEVRGAKENNLKNLNVKIPLGVFTAVTGVSGSGKSTLVNEILYKTLARD
LNRARVRPGQHKEIRGLEHIDKVVDIDQSPIGRTPRSNPATYTGVFDDIRDLFSKTNEAK
IRGYQKGRFSFNIKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKG
KSIADILDMTVEDATEFFENIPKIHRKIQTLMDVGLGYVKLGQPATTLSGGEAQRVKLAS
ELYRRSTGKTIYILDEPTTGLHVHDIDRLLMVLHRLVDSGETVLVIEHNLDVIKTADYLI
DLGPEGGSGGGTILATGTPEQLVKVEESYTGRYLKPILERDTERSQALQTVDL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaatgaaagcatcatcatcaaaggcgcacgggcgcataatctcaaaaatattgac
gtgacgattccgcgtgataaatttgtcgttcttacggggcttagtggctcgggtaaatcg
tcactggctttcgatacgatctatgcggaaggacagcggcgctacgtggaatctctatct
gcgtatgcacgtcagttcctcggacaaatggagaagccggatgtcgactcgattgatggt
ctgtctcctgcgatatctattgaccaaaaaaccaccaaccggaatccgcgttctactgtc
ggtacggttacagaaatctatgattacttgcggttgttgtttgcgcgagtgggtcaccct
cattgccctgaacacggcattgagatcacatcccagaccgttgaacagatggtggatcgc
atcatgcagtatcctgaaaagacacgactgcaaattttggctccattggtatccggacgc
aaaggtgagcataaaacactattcgcggatatagccaagcagggctttgtgcgggtacgt
gtcaatggcgaattgcgagagctgtcggaaaagatagagctggagaagaataagaagcat
tcgattgaagtggtcgtagaccggatcgtggtcaaggaagatgtgcgtgcgcgtctatcc
gactcgattgagacggctctaaaactgtcaggtggccaactgcttgtggatattatgggg
caagaagagctgcgatttagctctaattttgcgtgcccgatttgcggttttagcatagat
gagctgaccccgcggatgttctcttttaacaatccgtttggtgcttgcccggattgtgac
ggattgggtgctaaaatggtagtggaccctgatttgctcattcccgatcctcaaaagagc
gtggaggagggagcatttcaggcctggagtggtggaacttccacttattatccgcaattt
ttacagtcggtatgcgagcatttcggtattccgcaggatgttcctgttagccaattgacc
acagagcaaatgaacatcattttacacgggacggctgaccagaagattcggttccgttac
gaaaatgattttggtcaacgcaaggaagcctatgtgacctttgagggaatcattccgaat
ctggagcgccgttatcgtgacacagcttctgatggtatccgtgaatttattgaaggcttc
atgagcgccaaaccatgtaacacctgtaagggacaccgcctgaagaaagagagcctggcg
gtaaccattcaggagcaaaatatcgcctatgtgactgatttgtccatcacagaagcggct
cacttttttcaaacgctggagctgagtgagaaggagaaatcgattgccaatctcatttta
aaagaaattaacagccgtttgggcttcctggtcaatgtcggtctggaatatttgacatta
agccgttccgcaggaacgttgtccggtggtgaggcacagcgtattcggctggcgacacaa
attgggtccagtctaatgggcgtgctctatattttggacgagcctagtatcggattgcac
cagcgagacaatgaccgcctgattagtgctttggagcatatgcggaatctcggaaatacg
ttgattgtggtggagcatgacgaagatacaatgatggcggcggactatatcattgatatt
ggaccgggagcaggaatccatggcgggatgatcatgtcccaggggaccccgcaggaagtc
atggaagatccgaactccttgacagggcaatatttgagcgggcgcaagttcattccggtc
aataccgaacggcgcaagcctgcggataagtggctggaggttcgcggggccaaggagaac
aacctcaaaaatttgaatgttaaaattccgttaggtgtgtttaccgctgttactggcgta
tccggttctggcaagtcaacactggtcaacgaaatcctgtacaaaacgctggcgcgtgat
ctgaaccgggcgagagtacgtccgggccagcataaggaaattcgcgggcttgagcatatt
gataaggttgttgatattgatcagtctccgatcggccgtacgccgcgttccaatcctgcg
acctacaccggggtatttgatgatattcgtgatttgttttcaaaaacaaatgaggccaag
atccgaggttaccaaaaaggtcgctttagctttaacattaaaggtggtcgctgtgaagct
tgtaaaggtgacggcataatcaagattgagatgcatttcctgccggatgtgtacgtcccg
tgcgaagtgtgcaaaggcaaacggtataatcgggagaccttagaggttaaatacaagggc
aaaagtattgctgatatactggatatgacggtagaggacgcgacagagttttttgaaaat
atcccgaagattcatcgcaagattcagacgctgatggatgtaggcttgggttatgtcaag
ctgggtcagcctgcgactaccctgtctggaggtgaagctcagcgcgtgaagctggcttct
gagctgtatcgtcgcagcacaggcaaaacgatctatattttggacgagccgacaaccggt
ctgcacgttcacgatattgaccgattattgatggtactgcatcgtttggttgattcagga
gagacggtgctggttattgagcataatctggatgtgattaagacagccgattatttgatt
gatctgggaccggaaggcggaagcggcggtggaacgatcttggctactggaacaccggag
cagctcgtgaaagtggaagaatcgtatacaggccgatatttaaaaccaatccttgaacgg
gatacggagcgcagccaagcgcttcagaccgttgatctatag
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