Pseudomonas knackmussii: PKB_0045
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Entry
PKB_0045 CDS
T03081
Symbol
fadd1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00061
Fatty acid biosynthesis
pkc00071
Fatty acid degradation
pkc01100
Metabolic pathways
pkc01212
Fatty acid metabolism
pkc02024
Quorum sensing
Module
pkc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PKB_0045 (fadd1)
00071 Fatty acid degradation
PKB_0045 (fadd1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKB_0045 (fadd1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pkc01004
]
PKB_0045 (fadd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkc04147
]
PKB_0045 (fadd1)
Enzymes [BR:
pkc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PKB_0045 (fadd1)
Lipid biosynthesis proteins [BR:
pkc01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
PKB_0045 (fadd1)
Exosome [BR:
pkc04147
]
Exosomal proteins
Exosomal proteins of breast milk
PKB_0045 (fadd1)
Exosomal proteins of breast cancer cells
PKB_0045 (fadd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CDF81424
UniProt:
A0A024HA18
LinkDB
All DBs
Position
complement(43672..45303)
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AA seq
543 aa
AA seq
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MPITAEGYVARQIAEHAYQNVHDLLRDAARQHPERPAFSCGPSSLSFAELERHSDAFARY
LRHCAGLQAGERLALMLPNSLQYPIAAFGALKAGLVLVNTNPQYTAGELTHQLRDSGAVA
ILLLDRLLPLLRKVQGDSAVRQLLLTSVDDIEQPQYACDEPDATRFMQALRLGAEAPPLD
AEPGLERLALLQYTGGTTGVSKGAMLTHHSLLANVIQTLELFMRPGLLDPATDVRIAPLP
LYHIMAFATNCLSSVGMGLHTVVIRDGRNLDEIIGAMRRYPFSLLSGLNSLFVGLMNHPD
FTSIDFSHLKWVTSGGGPLNLEVGRRWQALTGAPVLEGFGLTEASPVVCTNTRLTPYREG
FVGAALVDTEVRILDEEGNPCAVDEPGELCLRGPQVMLGYWQRPEETAQVLDADGWLRTG
DIALQDANGLLKIVDRKKDMILVSGFNVFPNEVEDAAMRHPGIRECLAIGVPDARKGEAV
KLFVSLRDPALDAAAIIAHCREHLTGYKVPSQVEILDELPKSSVGKMLRRELRDRERQRS
DAS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcactgccgaaggttacgtcgccaggcaaatcgccgagcacgcctaccagaat
gtccacgacctgctgcgcgatgccgcgcgccagcaccccgagcgaccggccttctcctgc
gggccgagcagcctgagcttcgccgagctggaacgccactccgacgccttcgcccgctac
ctgcgccactgcgccggcctccaggcgggcgagcgcctggcgctgatgctgcccaattcg
ctgcagtacccgatcgccgcctttggcgcgctcaaggccggcctggtgctggtcaacacc
aatccgcagtacaccgccggcgagctcacgcaccagctgcgcgactccggcgcagtggcc
atcctgctgctcgaccgcctgctgccgctgctgcgcaaggtgcagggcgacagcgccgtg
cgccagctgctgttgacctcggtggacgacatcgagcagccgcaatacgcctgcgacgag
cccgacgccacgcgcttcatgcaggccctgcgcctgggcgccgaagcgccgccgctggac
gccgaaccgggcctggagcgccttgcgctgctgcaatacaccggcggcaccacgggcgtt
tccaagggcgccatgctgacccaccacagccttctggccaacgtcatccagaccctcgaa
ctgttcatgcgccccggcctgctcgacccggccaccgacgtgcgcatcgcgcctctgccg
ctctaccacatcatggccttcgccacgaactgcctgagctcggtgggcatgggcctgcac
acggtggtgatccgcgatgggcgcaacctcgacgagatcatcggcgccatgcgccgctac
ccgttcagcctgctcagcgggctgaacagcctgttcgtcgggctgatgaaccacccggac
ttcaccagcatcgatttcagccacctgaagtgggtcaccagcggcggcgggccgctcaac
ctggaagtcggccgacgctggcaggcgctcaccggcgcgcccgtgctggaaggcttcggc
ctcaccgaggcgtcgccggtggtgtgcaccaacacccgtctgacgccctatcgcgaaggc
ttcgtcggcgcggcgctggtcgataccgaggtgcgcatcctcgatgaggaaggcaaccct
tgcgccgtggacgagcccggcgagctgtgcctgcgcggcccgcaggtgatgctcggctac
tggcagcgcccggaggaaaccgcccaggtgctcgacgccgacggttggctgcgcaccggc
gatatcgccctgcaggacgccaacggcctgctgaagatcgtcgaccgcaagaaggacatg
atcctggtctccggtttcaacgtcttccccaacgaggtggaggatgccgcgatgcgccac
ccgggcatccgcgagtgcctcgccatcggcgtgccggacgcgcgcaagggcgaggcggtg
aagctcttcgtcagcctgcgcgacccggcgctggatgccgccgcgatcatcgcccactgc
cgcgaacacctgaccggctacaaggtgcccagccaggtcgagatcctcgacgagctgccc
aagagttcggtgggcaagatgctccgccgcgaactgcgcgaccgcgaacggcaacggagc
gacgcctcgtga
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