Pseudomonas knackmussii: PKB_2104
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Entry
PKB_2104 CDS
T03081
Symbol
catR
Name
(GenBank) HTH-type transcriptional regulator CatR
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkc03000
]
PKB_2104 (catR)
Transcription factors [BR:
pkc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PKB_2104 (catR)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CDF83451
UniProt:
A0A024HEZ7
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Position
complement(2183313..2184185)
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AA seq
290 aa
AA seq
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MELRHLRYFQAVAETLNFTRAAERLHIAQPPLSRQIQQLEELLGVELLERGRPLRLTEAG
RFFYEQSGTLLKQLENICDNTRRIGLGQRQWLGIGFAPSTLYAVLPELIRELRADSELEL
GLQEMTTLQQVEALKAGRIDIGFGRIRFDDPAIHQQVLREDPLVAVLPTGHPLLGAPVSL
EQLSREPFILYPANPRPSYADHVLALFANHGLSIRVAQWSNELQTAIGLVAAGLGVALVP
ASVQQQHRPDIGYASVLEPEAVSPIVLSRRAGDVSAMVQRCLALIDQVNR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgacatctgcggtacttccaggcggtcgcggaaaccctcaacttcacccgc
gccgccgagcgcctgcacatcgcccagccgccgctgagccggcagatccagcagttggaa
gagctgctcggcgtcgagctgctggagcgcggccggccgctgcgcctgaccgaggccggg
cgcttcttctacgagcagagcggcaccctgctcaaacagctggagaacatctgcgacaac
acccggcgcatcggcctcggccagcgccagtggctgggcattggtttcgcgccttccacc
ctctatgcggtgttgcccgaactgatccgcgaactgcgcgccgacagcgagctggagctg
ggcctgcaggaaatgaccaccctgcaacaggtcgaggcgctgaaggccgggcgcatcgac
atcggcttcggccgcatccgcttcgacgacccggcgatccaccagcaagtcctgcgcgag
gacccactggtggccgtgctgcccaccgggcaccctttgctgggcgcgccggtcagcctt
gagcaactgtcccgcgagcccttcattctgtacccggccaatccgcggccgagctatgcc
gaccacgtgctggcgctgttcgccaaccacggcttgagcatccgcgtggcgcagtggagc
aacgagctgcagaccgccatcggcctggtcgccgccggcctgggcgtggcgctggtgccg
gcctcggtgcaacagcagcaccgcccggacatcggctacgccagcgtgctggagcccgag
gcggtatcgcccatcgtgctcagccgccgcgccggcgacgtcagcgccatggtccagcgc
tgcctggcgctgatcgaccaggtaaaccgctga
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