KEGG   Pseudomonas knackmussii: PKB_2840
Entry
PKB_2840          CDS       T03081                                 
Name
(GenBank) type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc02025  Biofilm formation - Pseudomonas aeruginosa
pkc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PKB_2840
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PKB_2840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkc02044]
    PKB_2840
Secretion system [BR:pkc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PKB_2840
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: CDF84187
UniProt: A0A024HI63
LinkDB
Position
2957908..2958390
AA seq 160 aa
MAIPAHLWLKDDGGADIKGSVNVMGREGSIEIFGFGHGLFLPVDDSSGKITGTRQHAALT
FEKEFDYSSPYLYKAVAKGQTLKSAEFKWYRINDAGQEEEYFNMLLEDVKVVAICPMMHD
CKDAAMEKHNHTESISLRYARITWKHCDGNIIFSDAWNER
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcgattccggcacacctctggctgaaagatgacggcggcgcggatatcaagggcagc
gtcaatgtaatggggcgcgaaggcagcattgaaatcttcggttttgggcatggcctgttc
cttccggtcgacgacagcagcggcaaaatcacgggaacaaggcagcatgcagcgctgact
ttcgagaaggaattcgattattccagcccttatctctataaggccgtggccaaggggcaa
acgctgaaatcggcggaattcaagtggtacaggatcaatgacgcaggccaggaagaggag
tacttcaatatgctccttgaggatgtgaaggtggttgccatctgcccaatgatgcacgac
tgcaaggatgcggcgatggaaaaacataaccataccgagtcaatatctctacgttacgcc
aggatcacctggaaacactgcgacggaaatatcatcttttctgatgcatggaacgaaaga
tga

DBGET integrated database retrieval system