KEGG   Pseudomonas knackmussii: PKB_4088
Entry
PKB_4088          CDS       T03081                                 
Name
(GenBank) motility protein FimV
  KO
K08086  pilus assembly protein FimV
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkc02044]
    PKB_4088
Secretion system [BR:pkc02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   PKB_4088
SSDB
Motif
Pfam: LysM DUF3450 ATG16 TPR_14 CCDC22_CC MscS_porin DUF5798 Tmemb_cc2 TPR_19 Exonuc_VII_L FlxA CASP_C MIS13 ATG14 DUF5930 Filament DUF4407 GAS USHBP1_PDZ-bd Phage_GP20 Med9 HAUS-augmin3 Crescentin TMPIT DUF4795 FAM76 TPR_4 Sec3_CC DUF4763 Spike_torovirin TFIIA Baculo_PEP_C Laminin_II FliJ Tropomyosin Fib_alpha Prefoldin V_ATPase_I DUF1664 IFT57 CENP-F_leu_zip Phage_GPO
Other DBs
NCBI-ProteinID: CDF85417
UniProt: A0A024HLL5
LinkDB
Position
complement(4294250..4296325)
AA seq 691 aa
MARINRLPLAMAVLSAVMASQAQALGLGDITLRSALNQPLDAEIALLQVGDLTSEELVAH
LANAATFERLGVDRPTFLQSLRFTPVIRGGRSYIHVVSTQAVREPYLNFLVEVERPNGSL
MREYTLLLDPPGYSETRSYSSYADTRPERADSYASSTRPVSHDAAPRKASKPAVAATPGD
GRYTTVSGDSLWSISGRLAGQGVSRHTYMAQLQQLNPQAFVGGNPHRLRIGQTLVLPAGL
TPASTTAGAAGTPPAASAAPVAPSAPAAPAIAAATQQQVDQAQSQLADMSAERDKLNQRM
DDLQKQLNTLQQTLESRDQQVQSLEAQLAQRQAAAAAAQPAPAPAPVVAKPAPAAAAPAP
SAAPDEGLVRYWPWAAALGAALLLGVLYGRRRKPEATEPPRVQAAAASLPPQQPVRPAPV
VKPVSVPVAAPVAPVTSDASLAKLPTASSDSLEGANIYIAYGRFGQARDMLLKAIVAEPE
RRELRMKLLLVLAELGEVGAFHEQEKALVAMGGDQKQIDQLKTRYPAMLEREESVAISDS
LGDWEGLELDEIVAEPVQEEQPMLGDNELNLGDLPMDLDWSALDPFETPKTASTKAKAAA
EPVLEDFRSNLRELPEVTEFDLDGEHAGAFGLPSRPVVSGEQDKLLASLDEARACIDRGD
LEQAYRILKRVLEDGDSHQREEARELLARIA
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggctcgaatcaaccgcttgccgctggcaatggccgtgctctcggccgtcatggcttca
caggcgcaggcgctgggactgggtgacatcaccctgcgttccgcgctgaaccagcccctg
gatgccgagatcgcattgcttcaggtcggcgacctgacctccgaggagctcgtcgcccac
ctggcgaacgccgccaccttcgagcgactcggcgtcgaccgcccgaccttcctgcagagc
ctgcgtttcaccccggtgatccgtggcggccgcagctacatccatgtggtttccacccag
gcggtgcgcgagccctatctgaatttcctcgtcgaggttgagcgccctaacggcagcctg
atgcgcgagtacacgctgctgctcgatccgccgggctacagcgaaacgcgcagctacagc
agctatgcggacacccgccccgagcgcgccgacagctacgcgtccagcacccgcccggtt
tcgcatgacgccgcgccgcgcaaggccagcaagcctgcggtcgcggccactcccggcgat
ggccgttacaccacggtcagcggcgattcgctgtggagcatctccggccgcctggcgggg
caaggcgtgtcccgtcacacctacatggcgcagttgcagcagttgaatccgcaggccttc
gtcggtggcaatccccatcgcctgcggatcggccagacactggtgctgcccgccggcttg
acacccgccagcacgaccgcgggcgctgccggaacgccgccagccgccagcgcagccccg
gtcgcaccgagtgcccctgcagcgccggccattgctgcagcgactcagcaacaggtcgac
caggcccagagccagttggccgacatgagtgccgagcgcgacaagctcaaccagcgcatg
gatgacttgcagaagcagctaaataccctgcagcagaccctggaaagccgcgaccagcag
gtgcaatccctggaagcgcagctggctcaacgtcaggcggcggcagcggcggcgcagccg
gcaccagcaccagcgccggtcgttgccaaaccggctcctgccgcagctgctccggcaccc
agcgctgcgccggatgaaggcctggttcgctactggccctgggcagccgctctcggcgcc
gcattgctgctgggcgtcctctacggtcgccggcgcaagccggaagccaccgagccgccg
cgggtacaggccgccgccgccagcctgccgccgcaacaaccggtgcggccggcgccggtg
gtcaagccggtcagcgttccggtcgccgcccccgtcgcacctgtcaccagcgacgcttcg
ctggccaagctgccgacggccagcagcgacagcctggaaggcgcgaacatctacatcgcc
tacggccgcttcggccaggcccgcgacatgctgctcaaggccatcgtcgccgaacccgag
cgccgcgagctgcgcatgaagctgctgctggtcctggccgaactcggcgaggtcggcgcc
ttccatgagcaggagaaggccctggtggccatgggcggcgatcagaagcagatcgatcag
ctgaagacgcgctacccggccatgctggagcgcgaggagagcgtggcgatcagcgacagc
ctcggcgactgggaagggctggagctggacgaaatcgtcgccgagccggtccaggaagag
cagccgatgctcggcgacaacgagctgaacctcggcgatctgccgatggacctcgactgg
agtgccctggaccccttcgagacgccgaaaaccgcatcgaccaaagccaaggcggcagcc
gagccggtgctggaagacttccgcagcaacctgcgcgagctgccggaggtcaccgagttc
gatctcgacggcgagcacgccggcgccttcggcctgccgtcacgcccggtcgtcagcggc
gagcaggacaagctgctggccagcctcgacgaggcgcgggcctgcatcgatcgcggcgac
ctggagcaggcctaccgcatcctcaagcgcgtgctcgaggacggcgactctcaccaacgc
gaagaagcgcgcgagctgttggcgcgcatcgcctga

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