KEGG   Pseudomonas knackmussii: PKB_5087
Entry
PKB_5087          CDS       T03081                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA homolog
  KO
K04485  DNA repair protein RadA/Sms
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkc03400]
    PKB_5087 (radA)
DNA repair and recombination proteins [BR:pkc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     PKB_5087 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Rubredoxin_2 ChlI Lon_C DnaB_C AAA_16 AAA_22 AAA SLFN-g3_helicase GvpD_P-loop Rad51 RecA nSTAND3 AAA_24 AAA_14 NTPase_1 MCM PAXNEB AAA_29
Other DBs
NCBI-ProteinID: CDF86400
UniProt: A0A024HMW4
LinkDB
Position
complement(5349816..5351306)
AA seq 496 aa
MTACATGICLLCELAIRGAKIARFNCRLLLAGTTTESAPMAKAKRMYGCTECGATFPKWA
GQCADCGAWNTLVETVIDNTPTGGTGSSGRGGWAGQQANIKTLAEVSIEEMPRFSTASNE
LDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRLPALYVTGEESQQQVAMRARR
LGLPEDKLKVMTETCIESIISTARQEQPKVMVIDSIQTIFTEQLQSAPGGVAQVRESAAL
LVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDGRLRLLRAVKNRFGA
VNELGVFAMTDRGLKEVSNPSAIFLTRAQESVPGSVVMATWEGSRPMLVEVQALVDTSHM
ANPRRVTLGLDQNRLAMLLAVLHRHGGIPTYDQDVFLNVVGGVKVLETASDLALMAAVMS
SLRNRPLDHQLLVFGEVGLSGEVRPVPSGQERLKEAAKHGFKRAIVPQGNAPKEAPAGLQ
VIPVTRLEQALDALFE
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgacggcgtgtgcgaccgggatatgcctgctctgcgagctggcgatccggggtgctaag
atcgcccgcttcaattgccggctccttctcgccggcactacgacggagtccgcccccatg
gccaaggccaagcgtatgtacggctgcaccgagtgcggtgccactttccccaaatgggcc
ggccagtgtgctgactgcggtgcctggaataccttggtcgaaaccgtcatcgacaacacg
cccaccggcggcaccgggagttccgggcgcggcggctgggccgggcagcaggccaacatc
aagaccctcgccgaagtcagcatcgaagagatgccgcgcttctccacggcctccaacgaa
ctcgaccgcgtgctcggcggcggcttggtggatggctcggtggtgctgatcggcggcgac
ccgggcatcggcaagtcgaccatcctcctacagaccctgtgcaacatcgccacgcgtctg
ccggcgctctacgtcaccggcgaagagtcgcagcagcaggtcgccatgcgcgcgcgccgc
ctgggcctgccggaagacaagctcaaggtcatgaccgagacctgcatcgaaagcatcatc
tccacggctcgccaggagcaaccgaaggtgatggtgatcgactcgatccagaccatcttc
accgagcagctgcagtccgcccccggcggcgtcgcccaggtgcgcgagagcgcggcgctg
ctggtgcgtttcgccaagcagagcggcacggcgatcttcctggtcggccacgtcaccaag
gaaggcgcgctggccggcccgcgcgtgctcgaacacatggtcgacaccgtgctgtatttc
gagggcgagtccgacggccgcctgcgcctgctgcgcgcggtgaagaaccgcttcggcgcg
gtcaatgaattgggcgtgttcgcaatgaccgaccgcggcctgaaggaagtctccaaccct
tcggcgatcttcctcactcgcgcccaggagtcggtgcccggcagcgtggtcatggctacc
tgggagggctcgcggccgatgctggtggaggtgcaggcgctggtcgacaccagccacatg
gccaacccgcgccgcgtgaccctgggcctggaccagaaccgcctggccatgctgctagcg
gtgctgcaccgccacggaggcatcccgacctacgaccaggacgtgttcctcaacgtggtg
ggcggggtgaaagtgctggagacggcctccgacctcgcgctgatggcagcagtgatgtcg
agcctgcgcaaccgtccactggatcaccagttgctggtgttcggcgaggtggggctatcc
ggcgaagtccgcccggtgcccagcggccaggaacgcctgaaagaggcggccaagcatggc
ttcaagcgcgccatcgtgccgcaaggcaatgcgcccaaggaggcgccggccggcctgcag
gtgatcccggtgacgcgtctggagcaggcgctggatgcgttgttcgagtag

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