KEGG   Pseudomonas knackmussii: PKB_5263
Entry
PKB_5263          CDS       T03081                                 
Symbol
orn
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkc03019]
    PKB_5263 (orn)
   03009 Ribosome biogenesis [BR:pkc03009]
    PKB_5263 (orn)
Messenger RNA biogenesis [BR:pkc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PKB_5263 (orn)
Ribosome biogenesis [BR:pkc03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PKB_5263 (orn)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: CDF86575
UniProt: A0A024HNF4
LinkDB
Position
complement(5530302..5530844)
AA seq 180 aa
MQNAQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNILEEGPVIAVHQSEEVLAGMDEW
NTRQHGQSGLTQRVRESTISAAEAEAQTLAFLEKWVPKRSSPICGNSICQDRRFLYRHMP
KLEAYFHYRNLDVSTLKELAARWAPQLRDGFKKGNTHLALDDIRESIAELRYYRETFIKV
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcagaacgcacagaacctgatctggatcgacctggagatgaccggccttgacccggac
cgggacgtgatcatcgaaatggccaccatcgtcaccgacagcgacctcaacatcctcgag
gaaggtccggtgatcgccgtccaccagagcgaggaagtcctcgccggcatggacgagtgg
aacactcgccagcatggccagtcgggcctgacccagcgcgtgcgcgaaagcaccatcagc
gccgccgaagccgaagcgcagaccctggcgttcctggagaagtgggtgcccaagcgctcc
tcgccgatctgcggcaacagcatctgccaggatcgccgcttcctctaccgccacatgccg
aagctggaagcctacttccactaccgcaacctcgacgtctccacgctcaaggaactggcc
gcgcgctgggcaccgcagctgcgtgacggcttcaagaagggcaacacccacctggcgctg
gacgacattcgcgagtccatcgccgagctgcgctactaccgcgagaccttcatcaaggtc
tga

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