Pseudomonas kribbensis: DLD99_17190
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Entry
DLD99_17190 CDS
T06348
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pke
Pseudomonas kribbensis
Pathway
pke02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DLD99_17190 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pke02044
]
DLD99_17190 (tssB)
Secretion system [BR:
pke02044
]
Type VI secretion system
Imp/Vas secretion system core components
DLD99_17190 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AXI62131
UniProt:
A0A345RS65
LinkDB
All DBs
Position
3784450..3784992
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AA seq
180 aa
AA seq
DB search
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLAKLTERRF
TEIDRDNFNDVLASIAPRATLQVNNTLSGDDSKLNIELNFKHIDDFDPVRVVEQVTPLRR
LFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSARPDTAVPAADAEAPAEPQA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtacccagcacaagctcgaccgggttcgcccgccccgagtgcaaatcacc
tatgacgtcgaaatcggcaacgccatcgagaaaaaggaattgccactggtggtcgggatt
cttgccgacctctcgggcaagccgctcgaaccactggcaaaactgaccgaacgccgtttc
accgaaatcgaccgcgacaacttcaacgacgtcctcgcctccatcgcccctcgcgccacg
ctgcaagtcaacaacaccctcagcggcgacgacagcaagctgaacatcgaactcaacttc
aaacacatcgacgatttcgacccggtcagggtggtggagcaagtcactccgctgcggcgc
ctgttcgaagcccgtcagcgcctgcgcgatctgctgaccaaactcgacggcaacgacgat
ctcgacaagctgttgcgcgatgtcatcgccaacaccgaaggcttgcaagagatcaaatcg
gctcgcccggacaccgctgtcccggcagctgatgccgaggccccggccgaaccgcaagcc
tga
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