Paramormyrops kingsleyae: 111839265
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Entry
111839265 CDS
T05788
Symbol
kdm2b
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111839265 (kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pki03000
]
111839265 (kdm2b)
04121 Ubiquitin system [BR:
pki04121
]
111839265 (kdm2b)
03036 Chromosome and associated proteins [BR:
pki03036
]
111839265 (kdm2b)
Enzymes [BR:
pki01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
111839265 (kdm2b)
Transcription factors [BR:
pki03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
111839265 (kdm2b)
Ubiquitin system [BR:
pki04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
111839265 (kdm2b)
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
111839265 (kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
111839265 (kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
LRR_4
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
111839265
NCBI-ProteinID:
XP_023658775
Ensembl:
ENSPKIG00000023247
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MCCYVPGRALCCLTKALHQSVTKHHTASMLIEQELSSQRLDMDGALYGTYGEGPQGRDEP
FPPASSSTLLQEQGDRPVACLPELPQTPSGSPAMEPPTRWTHLTEFELKGLKALVEKLES
LPDGGRHLAPGPEDPQALLEGMTMVLKEHVDDGSTLAHAGIPPMGWPGKPLKQQRPANRP
KPPKVGVAGTVKLAASRGPAGARRRRTRCRRCEACLRTECGECHFCKDMKKFGGPGRMKQ
SCIMRQCIAPVLPHTAVCLVCGEAGKEDTLDEEEDKFNVMLMECSICNEIVHPACLEVKD
AGGVVNDELPNCWECPKCSHAGKTGKACKQKRGPGFKYASNLPGSLLKEQRPGRDPREEG
DLATPAVTVATVARRQLEETPRHRLEEQVAKKRPAVPPADGQAWPRPEDDALQKKRKLTD
DDDTPDPNGGNKRKSPKPDQLLTSIIKREQDEEGGSRELGYQWNYGEEEEEEEEEREQEA
QEGTRHTEKAEEEEQEARQGARHTEEAQEEEERGGVFRTPSCESDLSRCNSSPRAGPSGE
GGLELQDKARVRARARRPVRLPCRELSRELSKELNQEIQKTEDCLANESRQPVKAEPDSE
TDEPKRVVSMAAMEMAGDWLRPCERETNGAPLREPPMQPTAGAGRRPLGVQMERHVIRPP
PISPPPDRLPLADGHAHILRRELWMAIFSHLSHQQLCVCMRICKTWNRWCCDKRLWTQID
LKRSKSITPLMLSGIIRRQPISLDLSWTNISKKQLSWLINRLPGLRVLLLSGCSWVAVSA
LCTSSCPLLRTLDVQWVEGLKDTQMRDLLSPPTDNRPGQLDGRSKLRNVTDLRLAGLDIT
DASLRLIMRHMPLLARLDLSYCNHITDQSVNILTAVGSTTRDSLTQINLSVCNRVTDQSL
SFFKRCGSICHIDLRFCKQVTPEGCQRFAAEMSVSVQFSLLEDKLLQKLS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgctatgtcccaggaagagctctctgctgcctgacaaaagctctccatcaaagt
gtcactaaacaccacacggcgtccatgctgattgagcaggagctgagtagccagagattg
gacatggacggggccttgtatgggacttatggcgaaggcccccagggcagagatgagccg
tttcctcccgcctccagcagcaccctcctgcaggagcagggtgaccgccccgtggcctgc
ctgccggagcttccccagacaccatcgggatctccggcaatggagccccccactcgctgg
acacacctcacagagttcgagctgaagggtctgaaggccttggtggagaagctggagtcc
cttccagatggggggagacaccttgccccaggccccgaggacccgcaggccctgctggaa
ggcatgacgatggtgctgaaggagcatgtggatgatggctctaccttggcccacgccggc
atcccccccatgggttggcccggcaagccactcaagcagcagaggccagccaatcggccc
aagccacccaaagtgggcgtggcaggcacggtcaagctggcggcaagtcgggggccggcg
ggggcgcggcggcgcaggactcggtgccgccgctgcgaggcctgtctgcgcaccgaatgc
ggcgagtgccacttctgcaaggacatgaagaagtttggtggcccgggccgcatgaagcag
tcctgcatcatgaggcagtgcattgcacccgtgctaccccacactgctgtgtgtctggtt
tgcggggaggctggcaaagaggacacgctagatgaagaagaggacaagttcaatgtgatg
ctcatggagtgctctatctgcaatgagattgtgcaccccgcctgcctagaggtcaaagat
gccggcggtgtggtcaatgatgagcttcccaactgctgggagtgtcccaagtgcagtcat
gccgggaagactgggaaagcttgcaagcaaaaaagaggaccagggttcaagtacgcgtcc
aacctgccgggctccctgctaaaggagcagcggccgggcagggaccccagggaggaggga
gacctggccacccctgctgtcaccgtggcaactgtcgctaggaggcagctcgaggagacg
cccaggcacaggctcgaggagcaagttgcgaagaagcggcccgcggtgccccctgcagac
ggccaggcgtggcccagaccagaggatgacgcattgcagaagaagcgcaagctgactgac
gacgacgacacccctgaccccaacggtgggaataagaggaagtcgccaaagcctgaccag
ctgctcaccagcatcatcaagagagagcaggacgaggaaggagggagcagggagttgggg
taccagtggaactacggggaggaggaggaggaggaggaggaggagagggaacaagaggca
caggaagggacacgccacacggagaaagccgaggaggaagaacaggaggcaaggcaagga
gcacgccacacggaggaagcccaggaggaggaggagagaggcggagtgttccggacgccc
tcatgcgaaagtgatctatcacgctgcaactcctccccgagggcagggcccagtggtgag
ggtggcctggagctccaggacaaggcacgggtgcgagcacgagccaggaggccagtgcgg
ctgccctgcagggagctgagcagggagctcagcaaggagctcaatcaggagatccagaag
acggaggactgcctggccaatgagagccgacagccagtcaaggcagagcctgacagcgag
accgacgagcccaagcgggtggttagcatggctgccatggaaatggctggagactggctc
cggccttgtgagcgtgagaccaacggtgcccccctacgggagccccccatgcagcccaca
gcaggggcaggccggcgccccttaggggtgcagatggaacggcacgtcatccggccaccc
cccattagcccccccccagaccggctgccactggcagacggacacgcccacattctacgc
cgtgagctctggatggccatcttcagccacctgagccaccagcagctatgcgtgtgcatg
cgcatctgcaaaacctggaaccgctggtgctgtgacaagcgtctgtggacccagatcgat
ctgaagcgcagcaagtccatcaccccgctgatgctgagcggaatcatccgcaggcagcct
atctctcttgacctgagctggaccaacatctcaaagaagcagctgagctggctcatcaac
aggctccccggtctccgggtcttgcttctgtcaggttgctcctgggtagctgtttctgcc
ctctgcacctccagctgcccccttctgcgcactctggatgtgcagtgggtggagggactg
aaggacacccagatgagagacctgctatcaccccctactgacaacaggccagggcagctg
gatggccgcagcaagctgaggaacgtgacagacctgcggctggcgggcctggacatcacg
gatgcctcgctacgcctcatcatgcgccacatgccgctgctggcccggctggacctcagc
tactgcaaccacatcacggaccagtcggtgaacatcctgacggcagtgggctcgaccacg
cgggactccctcactcagattaacctgtcagtctgtaacagggtcacagaccagtcgctg
agcttcttcaagcgctgtgggagtatctgccacatcgacctgcgcttctgcaagcaggtg
acgccggagggctgccagcgcttcgccgcagagatgtccgtcagtgtgcagttcagcctt
ctggaggacaagctgctgcagaaactgagctag
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integrated database retrieval system
