KEGG   Paramormyrops kingsleyae: 111856134Help
Entry
111856134         CDS       T05788                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
pki  Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:pki00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pki01009]
    111856134 (hdac6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pki03019]
    111856134 (hdac6)
   04131 Membrane trafficking [BR:pki04131]
    111856134 (hdac6)
   03036 Chromosome and associated proteins [BR:pki03036]
    111856134 (hdac6)
Enzymes [BR:pki01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111856134 (hdac6)
Protein phosphatases and associated proteins [BR:pki01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111856134 (hdac6)
Messenger RNA biogenesis [BR:pki03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     111856134 (hdac6)
Membrane trafficking [BR:pki04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    111856134 (hdac6)
Chromosome and associated proteins [BR:pki03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     111856134 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 111856134
NCBI-ProteinID: XP_023691605
Ensembl: ENSPKIG00000024072
LinkDB All DBs
Position
Unknown
AA seq 1143 aa AA seqDB search
MQKERKGIQKERFLQHLEVSSSMDSPPNPPESRSLRGSSCSPKSPDSKSKKKNSKPCSKK
TSLQEAKKKGRMEQSRGEEEMAKQLKNLDLNSKLKATGTGLVYSDVFARPCCLWDSGHPE
CPERVTAVMEKLESQRLLSRCVQVEARPATDQDLLLVHTKQYVELMKSTQKMSESELMSL
SKTYDSIYLHPESFHSATVAVGAVLQLIDKVLKSELRNGFAVTRPPSHHAQADKMNGYCM
FNSLAIAARYAQTQHGLERVLIVDWDVHHGQGIQYSFQEDPSVLYFSVHRYEGGAFWPHL
PESDSGALGSGVGEGYNINLPWNKTGVKDADYIAAFQQLLLPVAYEFRPQLVLVAAGFDC
LAGDPKGEMSASPQCFAVLTHLLQGLAQGRLILALEGGYNPQATADGVCACVRLLLGESC
PRLVPQRAPSDSALKSISQTISSLYPFWTSLQILEGGPMCKETSPVHPASVEPSGEGLGE
MPAQITGLAYDQRMMEHHNMWDSHHPEQPQRISRIFSRHKELGLVSRCLRIPARLATEEE
LATCHSLEHIAKIKSTEGMKPRDLHRLGDEYNSIYISSESYRCALLAAGTCFNSAEAVLT
GQVRNAVAIVRPPGHHAERDVACGFCFFNTAALTARYAQTFAKKPLRVLILDWDVHHGNG
TQHIFEDDDSVLYISLHRYDNGLFFPSSDDADFDKVGRGKGRGFNVNIPWSGGKMGDSEY
LAAFHAVVMPIAREFDPELVLLSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAAGRII
LILEGGYNLTSISESMSMCTSTLLGDSLPLLPPLPPPHPNASVTINRVLRSHALYWSSLR
IQIPESLRLSLPSPKAKGKRVSGGRDKRSPRQETPAKGSEQGAPPVSPAAAEAMEPGQPR
TAHQEEGLQDITAGLVSLNLDNSSSSPASVPVGGARRKVRPGSQENPAKGPPSAQVTPGK
KEVMETVNSTPPQDKMIMPLVDEPAMVTVAKGNPEPGESDEASGWSKLPKDGAVFELFTG
GLETDEGTMYVVDPLPWCPHLETVRPVPSGGIDVFLPCEDCGSDAENWVCLSCYKVLCGR
YINQHMVTHGLVSEHPVVLSFADLSVWCYSCEAYVHNKVLYEAKNAAHQVKFGENIPYTG
ESH
NT seq 3432 nt NT seq  +upstreamnt  +downstreamnt
atgcaaaaggaaaggaaaggcatacagaaggagagatttttgcaacatttggaagttagc
tctagcatggattctccccctaaccccccagaatcaagatcccttagagggtcgtcctgt
tcccctaaatcaccggactccaagtccaaaaagaagaacagcaaaccctgcagcaagaag
accagcctccaggaggccaagaagaaaggaaggatggagcagagcagaggagaagaggag
atggctaagcagctcaagaacctggacctgaacagcaagctgaaagccacaggcactggc
ctcgtttacagcgacgtctttgcccgcccctgctgcctctgggacagcggccaccctgag
tgtcctgagagagtgacggctgtaatggagaagttggagagccagaggctgctgtctcgc
tgtgtccaagtggaggcgaggcctgcgacagaccaggaccttctgcttgtccacacaaag
cagtatgtcgagctgatgaaatccacccagaagatgtctgagagcgagctcatgtctctc
tccaaaacctacgactctatctacctgcatcctgaatccttccactctgccacagtggca
gtgggtgctgtcctgcagctcattgacaaagtgctgaaatcggaactgagaaacggcttt
gctgtcaccagaccccctagtcaccatgcacaggcagacaagatgaacggttactgcatg
ttcaacagcctggccattgcggctcgatacgcacagactcagcacggcctggagcgggtc
ctgattgtggactgggatgtgcaccacggccagggaatccagtacagcttccaggaggac
cccagtgtgctgtacttctcagtgcacagatatgagggaggtgccttctggccccacctt
cccgaatctgacagtggggcgctgggctctggggtcggtgagggctataacatcaaccta
ccatggaacaagaccggtgtaaaggatgcagactatatcgccgccttccagcaactgctc
ctgcccgtggcgtatgagtttcggcctcagctggtcctcgtggcggctggctttgactgt
ttggcaggggatcctaagggagagatgtctgctagcccacaatgctttgctgtattaaca
cacctgttgcagggtcttgcccagggcagactcatcctggcactggagggagggtataac
cctcaggctaccgcagatggggtgtgcgcctgcgtcaggttgctgctcggagagtcctgc
ccccgcctggtgccacagagagcccccagcgacagtgccctgaagtccatctcgcagacc
atctcttcactttatcccttctggaccagcctgcagatactagaaggcggcccgatgtgc
aaggagacgagccccgttcacccggcctcagtggagccctctggtgagggcctaggggag
atgcctgcacagatcacagggctggcgtatgatcagaggatgatggagcaccacaacatg
tgggacagccatcaccctgagcaaccgcagaggatctcccgcatattctcccgtcacaag
gaactgggccttgtctcccgttgcctacggataccggcacgccttgccacggaggaggag
ctggccacgtgtcacagcttggagcatatagctaagatcaagtcaacagaggggatgaag
cccagggatttgcataggctgggagatgagtacaactcaatctacatcagcagtgagagc
tacagatgtgccctgctggcagctggcacttgtttcaactcggctgaggctgtgctcact
ggacaggtgaggaacgcggtggccatcgtgcgcccccccggccaccacgccgagagagat
gtggcctgtggcttctgcttcttcaacacggcggctctgaccgcgcgctacgcccagacc
tttgctaagaagcccctcagggtcctcatcctggactgggacgtgcaccatggcaacggc
acccagcacatctttgaggatgacgatagtgtgctgtacatctcgctgcaccgctatgac
aatggcctgttcttcccctcctctgatgatgccgacttcgacaaggtcggcaggggaaag
ggccgcggcttcaacgtcaacattccctggagtggcgggaagatgggcgactcggagtac
ctggcggccttccacgcggtggtgatgcccattgccagagaatttgacccagaactggtg
ctgttgtctgcgggttttgatgcggcccgtggtgaccccctggggggataccatgtgact
ccagagggatacgcccacctgacgcacctgctcatgagtctggctgctggtagaatcata
ctcatactagaggggggctacaacctgacttccatttccgagtctatgtcaatgtgcacc
agcacgctgctgggagacagcctccccctgctgcctccgctgccacccccgcatcccaat
gcctccgtcacaatcaaccgtgttctgcgctctcacgccctctactggagttctttgaga
atacaaattccagagtctctgcgcttgtctctgccttcgcccaaagcaaagggtaaacga
gtctcaggtggcagagacaagaggtctccgagacaggagaccccagccaaaggttctgaa
cagggtgctcctcctgtgagtccggcagcagctgaagcaatggaaccagggcagcccagg
actgcccatcaggaggaaggtctccaggacatcacggcgggccttgtgtctttgaactta
gacaacagttcctccagcccagcctctgtgcctgtagggggagccaggcgaaaggtgagg
cctggttcccaggaaaacccagctaaagggccaccatctgcccaggtgacaccaggaaag
aaagaggtcatggaaaccgtcaattccacccctccgcaggacaagatgattatgcctctg
gtcgatgaaccagccatggttactgttgccaagggaaacccagagcctggtgaatcggac
gaggcgtctggttggtcaaagttgccgaaggatggggcagtctttgagctctttactgga
ggcctggagacagatgagggtacgatgtatgtggtggaccccttgccatggtgccctcac
ctagagacggtcaggccggtgcccagcggggggatagatgtgtttctgccttgtgaagac
tgtggttcggatgcagagaactgggtctgcctcagctgctacaaggtgctctgcggccgg
tatatcaatcagcatatggtgacccacggcctggtttcagaacaccctgtggtcctcagc
ttcgcagacctgtctgtatggtgctacagctgcgaggcttatgttcacaacaaggtgcta
tacgaggcaaaaaacgccgcccatcaggtcaagttcggagagaacattccttatacggga
gagagtcactga

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