Pseudomonas koreensis: AYO71_26530
Help
Entry
AYO71_26530 CDS
T04647
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AYO71_26530
Enzymes [BR:
pkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AYO71_26530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
AAA_30
Flavi_DEAD
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMT90940
LinkDB
All DBs
Position
complement(5899730..5902249)
Genome browser
AA seq
839 aa
AA seq
DB search
MISLPIDDVLPALREALASRHEAVLEAPPGAGKTTRVPLALLNEAWLAGQTIVMLEPRRL
AARAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQDDPALEGVGL
LIFDEFHERSLDADLALALSLNGRELFRAEQPLKILLMSATLEGERLAGLLDDAPILRSE
GRMYPVSMRWGRPFQPGEYIDQRVTQTVLEALHDETGSLLVFLPGQAEIRRVHQQLADAI
GERKDILLCPLHGELDLNAQRAAIDPAPPGQRKVVLATNIAETSLTINGVRVVIDAGLAR
VPRFDPGSGMTRLDTQRISKASATQRAGRAGRLEPGVCYRLWSQDQHEQLAAYGSAEILS
ADLASLALQLGRWGVTPGELVWLDVPPAAAYAQAQDLLQRLGALHGDTLTTHGQAMAELP
AHPRIAHLLLRGQALGLAAMACDVAALLGERDILRGAGADLHSRLVLLSGEERAGRGTQG
GVQRARQLARQYRGYLRGKPSEPVNDPEHPRWLGALLALAYPDRVAQQRRAGGAEYRLAN
GRAALFAEADSLMKHEWIVIADLGSRQGQREERIYLAADFDPALFDSVLAEQVRSVDQLD
WDEREGVLRAERQRKVGELILSREPLTGLDENARSQALVNLVRRKGLELLPWTPELRQWQ
ARVALLRQLDLRTQDDSQWPDVSDTALLNTLEDWLMPYLGKVSRLSHFANLDLSSIVRNL
LPWPLPQKLDELAPHHLSVPSGSSIRLDYSEHPPILAVRLQELFGLADTPRIAGGRQVVK
LHLLSPARRPVQVTQDLANFWRSTYAEVKKDLKGRYPKHYWPDDPLVAEATARAKPRGT
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttgccgatcgatgatgttttacccgccctgcgtgaagcccttgcgtcacgc
cacgaagccgtgctcgaagcaccgcccggcgccggtaagaccacccgcgtgcccttggcc
ttgctcaacgaagcctggctggccgggcagaccatcgtcatgctcgaaccacggcgtctg
gccgcgcgcgcagcggcggaacgtttggccagcgagctcggtgagcaggtcggtgaaacc
gtcggctatcgcatccgcctcgacagcaaagtcggcccgaagacgcgtatcgaagtggtc
accgaaggcattctcacccggcgcttgcaggacgacccggcgctggagggtgtgggctta
ctgatcttcgacgaatttcatgaacgcagtctcgacgccgatctggcgctggccctcagt
ctgaacggtcgcgagctgtttcgcgctgaacagccgctgaagattctgctgatgtcggcg
accctcgaaggcgagcgcctggcggggttgctcgatgacgcgccgatcctgcgcagcgaa
gggcgcatgtatccagtgtcgatgcgctggggccggccgtttcagccaggcgaatacatc
gaccagcgcgttacccaaaccgtgctcgaagcgctgcacgacgagaccggcagcctgttg
gtgttcctgcccgggcaagcggagatccgtcgcgtacatcagcaattggccgacgccatt
ggcgagcgcaaagacatcttgctgtgcccgttgcacggcgaactcgacctcaatgcgcaa
cgcgcggcgatcgatccggcgccgcccggtcagcgcaaagtggtgctggcaaccaacatc
gccgagaccagcctgaccatcaacggcgtgcgcgtggtcatcgatgccgggctggcgcgg
gtgccgcgtttcgacccgggcagcggcatgacccgcctcgacactcaacgcatctccaag
gccagcgccacccagcgtgccggccgcgccgggcgattggagccgggcgtgtgttatcgc
ttgtggtcacaggatcagcacgaacaactggcggcctatggcagcgcggaaattctctcg
gcggatctggccagcctcgctttgcaactcgggcgctggggcgtgaccccgggcgaactg
gtctggctggatgtgccgccagcggccgcgtatgcccaagcgcaggatctgctgcaacgc
ctcggcgccttgcacggcgacacgctgacgacccacggccaggccatggctgaattgccg
gcgcatccgcgcattgcgcatttgctgttgcgcggtcaggcgctggggctggcggcgatg
gcctgcgatgtggcggcgctgctcggcgagcgcgatatcttgcgcggtgccggtgcggat
ctgcacagcaggctggtgctgctttccggcgaagagcgcgccggtcgtggtacgcagggc
ggggtacaacgtgcccggcaattggctcggcaatatcgcggctatctgcgcggcaagccg
agcgaaccggtaaacgatcccgagcatccgcgctggctcggcgcgctattggcgctggcc
tacccggatcgcgtcgcccagcaacggcgtgccgggggtgccgaataccgcttggccaac
ggtcgcgccgcgctgttcgctgaggccgacagcttgatgaagcatgagtggattgtcatc
gccgacctcggcagccgtcagggccagcgcgaagaacgcatctatctggcggcggatttc
gatccggcgctgttcgactcggtgctcgccgagcaagtgcgcagcgttgaccaactcgat
tgggatgaacgcgaaggcgtgctgcgtgccgagcgccagcgcaaggtcggcgagctgatt
ctcagccgcgaaccgttgaccggtctggatgaaaacgcgcgcagtcaggccctggtcaat
ctggtgcgacgcaagggtctggagctgctgccatggacgccagaactgcgccagtggcaa
gcgcgggtggcgctgttgcgccagctcgatctgcgcactcaggacgacagccaatggccg
gatgtcagcgatacagcgctgctcaataccctggaagactggttgatgccctatctgggc
aaggtctcgcggctgagccatttcgccaacctcgacctgtcgagcatcgtgcgcaatctg
ctgccgtggccgctgccgcagaagctcgacgagctggcgccgcatcatttgagcgtgccg
tcgggttcatcgattcgtctggattacagcgaacatccaccgattctcgcggtgcgtttg
caagagctgtttggtctggccgatacgccacggatcgccggcggccggcaagtggtcaag
ctgcatctgctgtcgccagcgcggcgaccggtgcaggtcacgcaggacctggccaacttc
tggcgcagcacctatgccgaggtgaagaaggatctgaaggggcgttatccgaagcattat
tggccggacgatcctttggtcgccgaagccacggcgcgggcgaaaccacggggcacctga
DBGET
integrated database retrieval system
