KEGG   Planococcus kocurii: AUO94_06750
Entry
AUO94_06750       CDS       T04200                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pku  Planococcus kocurii
Brite
KEGG Orthology (KO) [BR:pku00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pku03032]
    AUO94_06750
   03036 Chromosome and associated proteins [BR:pku03036]
    AUO94_06750
   03400 DNA repair and recombination proteins [BR:pku03400]
    AUO94_06750
DNA replication proteins [BR:pku03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AUO94_06750
Chromosome and associated proteins [BR:pku03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AUO94_06750
DNA repair and recombination proteins [BR:pku03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AUO94_06750
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2 Rpf1_C HU-DNA_bdg
Other DBs
NCBI-ProteinID: ALS78376
LinkDB
Position
3144276..3144548
AA seq 90 aa
MNKTELVNSVAEAAELSRKDAAKAVDAAFETIQDALTKGEKVQLIGFGNFEVRERAARKG
RNPQTGAEIEIAASKVPAFKPGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattagtgaactctgttgctgaagcagctgagctttctcgtaaagac
gctgccaaagcagttgacgctgcatttgagacgattcaagacgctttaactaaaggtgaa
aaagtacagttgatcggattcggtaactttgaagtacgcgaacgcgcggcccgcaaagga
cgtaacccgcaaactggtgctgaaatcgagatcgctgcaagcaaagttcctgcatttaag
ccaggtaaagcgcttaaagacgcagtgaagtaa

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