Plantactinospora sp. BC1: C6361_17840
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Entry
C6361_17840 CDS
T05377
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6361_17840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_17840
Enzymes [BR:
plab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C6361_17840
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C6361_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AVT31025
LinkDB
All DBs
Position
complement(4111646..4112425)
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AA seq
259 aa
AA seq
DB search
MRIGAHVDATDPLDEAALRKADAVQFFLADPQKDWKTPQPRADAARLRESEVDVYIHAPY
VINLATTNNRIRIPSRKLLLGHATAAAAVGAKGLVVHGGHVNAGDDIAKGFDNWRKAFAQ
AADSGGHDVPVLIENTAGGDNACARRFDNLARLWDAVGDYNVGFCLDTCHAHAGGEDLLD
IVDRVLAITGRIDLIHANGSKDGFDSGRDRHENLTGGTIDPELVVAVVRAAGAPVIVETP
GGVDGQAADIAYLRDRVGR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcggagcccatgtcgacgccaccgacccgttggacgaggcggccctccggaag
gcggacgcggtccagttctttctcgccgatccgcagaaggactggaagacgccacagcca
cgggccgacgccgcccggctgcgcgaatccgaggtggacgtctacatccacgccccgtac
gtcatcaacctcgccaccaccaacaaccggatccgcatccccagccggaagctgctgctc
gggcacgccaccgccgccgcggcggtcggcgccaagggcctggtcgtgcacggcgggcac
gtcaacgcgggcgacgacatcgccaagggcttcgacaactggcgcaaggcgttcgcccag
gccgccgactcgggcgggcacgacgttccggtactcatcgagaacaccgccggaggcgac
aacgcctgcgcccggcgcttcgacaacctggctcggctctgggacgcggtgggcgactac
aacgtcggcttctgtctggacacctgtcacgcacatgccggcggcgaggacctcctcgac
atcgtcgaccgggtgttggcgatcaccggccggatcgacctgatccacgccaacggctcc
aaggacggcttcgactccggccgggaccgtcacgagaacctgaccggcggcaccatcgac
cccgaactggtggtggcggtggtgcgggcggccggcgcaccggtcatcgtcgagacgccc
ggcggggtcgacggtcaggccgcggacatcgcctacctccgcgaccgcgtaggccgatag
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