Plantactinospora sp. BB1: C6W10_14530
Help
Entry
C6W10_14530 CDS
T05391
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6W10_14530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plat03019
]
C6W10_14530
03016 Transfer RNA biogenesis [BR:
plat03016
]
C6W10_14530
Enzymes [BR:
plat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C6W10_14530
Messenger RNA biogenesis [BR:
plat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C6W10_14530
Transfer RNA biogenesis [BR:
plat03016
]
Prokaryotic type
tRNA degradation factors
C6W10_14530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
RNase_PH_C
S1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
AVT37488
UniProt:
A0A2R4FJ25
LinkDB
All DBs
Position
3324888..3327278
Genome browser
AA seq
796 aa
AA seq
DB search
MTETSNPTNSTLGTQHRTAVIDNGSFGTREITFSTGRLARQAAGSVLAQLGETVVLSATT
ASRQPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVK
GLRNEVQVVETVLALDPQHPYDVVAINAASLSTKLSGLPFSGPIGATRMAHVDGQWVAFP
TIEELGRATFDMVVAGRTLPDGDVAIMMVEAEATEHTVALVAGGAPAPTEEVVASGLEAA
KPAIRELCRAQSELAEVSAKPVADFPVFLDYSDDVYEAVAGAARGEVAEALKIAGKADRE
EALDRIKERVVEQLAGSFEGREKELGAAFRSLNKSEVRARVLREQVRMDGRGPRDIRPLS
AEIAVLPRVHGSALFERGETQILGVTTLNMLRMEQALDTLSPEKSKRYMHNYNFPPYSTG
ETGRVGAPKRREIGHGALAERALIPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTL
ALLSAGVPLKAPVAGIAMGLISDEVDGKTQYVTLTDILGAEDAFGDMDFKVAGTREFVTA
LQLDTKLDGIPSDVLAAALAQAYEARQVILGVMQEAIEGPATMSDYAPRVTTVKIPVDKI
GMVIGPKGQTINAIQDETGAEISIEDDGTIYVGATNGPSAEAAVERINAIANPTLPKVGD
KFLGTVVKTAAFGAFISLLPGRDGLLHISKVGDGKRVERVEDFLNVGDKVEVSIADIDAR
GKIYLDKVRPEGEEAPAQPAGGERPAGRDRGDRGPRDRSDRDRGDRGPSRGDREGGEGGG
GEGGGGEPRRRRNRHS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacgtccaaccccacgaacagcacgctgggcacccagcaccgcaccgccgtg
atcgacaacgggtccttcggtacccgtgagatcaccttctccaccgggcggctcgcccgg
caggccgccggctccgtcctcgcccagctcggcgagaccgtggtcctctccgcgaccacc
gcgagcaggcagccgaaggagcagttcgacttcttcccgctcaccgtcgacgtcgaggag
cggatgtacgcggcgggtcggatccccggctcgttcttccggcgtgagggtcggcccagc
gaggacgcgatcctcacctgccggctgatcgaccggccgctgcgcccctccttcgtcaag
gggctgcgcaacgaggtacaggtcgtcgagaccgtgctggcgctcgacccgcagcacccg
tacgacgtcgtggcgatcaacgccgcctcgctctccaccaagctctccggcctgccgttc
tccggcccgatcggggcgacccggatggcgcacgtggacggccagtgggtcgccttcccg
accatcgaggaactgggccgggccaccttcgacatggtggtcgccggccgtaccctgccg
gacggcgacgtcgcgatcatgatggtcgaggccgaggcgaccgagcacaccgtggcgctg
gtcgccggtggcgccccggcgccgaccgaggaggtcgtggcgagcggcctggaggccgcc
aagccggccatccgggagctgtgccgggcgcagagcgagctggccgaggtctccgccaag
ccggtcgccgacttcccggtcttcctcgactactccgacgacgtctacgaggcggtcgcc
ggtgcggcgcgcggcgaggtcgccgaggcgctgaagatcgccggcaaggcggaccgcgaa
gaggccctggaccggatcaaggagcgggtcgtcgagcagctcgccggcagcttcgagggc
cgggagaaggagctcggcgcggccttccgctcgctgaacaagtccgaggtacgcgccagg
gtgctccgcgagcaggtccggatggacggccgtgggccgcgcgacatccggccgctgagc
gccgagatcgcggtgctgccccgggtgcacggctcggcgctcttcgagcgcggcgagacg
cagatcctcggcgtcaccacgctgaacatgctccggatggagcaggcgttggacaccctc
tccccggagaagtccaagcgctacatgcacaactacaacttcccgccgtactcgaccggt
gagaccggccgggtcggtgcgccgaagcggcgcgagatcgggcacggcgcgctggccgag
cgggcactgatcccggtgctgcccagccgcgaggagttcccgtacgcgatccgccaggtc
tccgaggcgctcggctcgaacggctccacctcgatgggttcggtctgcgcctccacgctg
gccctgctcagcgccggtgtgccgctgaaggccccggtcgccggcatcgcgatgggcctg
atctccgacgaggtcgacggcaagacgcagtacgtgacgctgaccgacatcctcggtgcc
gaggacgccttcggcgacatggacttcaaggtcgccggcaccagggagttcgtcaccgcg
ctccagctcgacaccaagctcgacggcatcccgtccgacgtgctcgcggcggcgctcgcg
caggcgtacgaggcgcggcaggtcatcctcggcgtgatgcaggaggcgatcgagggtccg
gccacgatgtcggactacgcgccccgggtgaccacggtgaagatcccggtcgacaagatc
ggcatggtgatcgggccgaagggccagaccatcaacgccatccaggacgagaccggcgcc
gagatctcgatcgaggacgacggcaccatctacgtcggcgcgaccaacggcccgtcggcc
gaggccgcggtcgagcggatcaacgcgatcgcgaacccgacgctgccgaaggtcggcgac
aagttcctcggcacggtggtcaagaccgccgcgttcggggcgttcatctcgctgctgccc
ggccgggacggcctgctgcacatctccaaggtgggcgacggcaagcgggtcgagcgggtc
gaggacttcctcaacgtcggcgacaaggtcgaggtgtcgatcgccgacatcgacgcccgg
ggcaagatctacctggacaaggtgcggcccgagggcgaggaggcgccggcccagccggcc
ggcggcgagcgtccggccggtcgggaccggggcgaccgtggcccgcgcgaccgcagcgac
cgggaccgcggcgaccgcggcccgagccggggcgaccgcgagggtggcgaaggtggcggc
ggcgagggcggtggcggcgagccgcgccgccggcgcaaccggcacagctga
DBGET
integrated database retrieval system