KEGG   Planomicrobium sp. Y50: DNR44_015230
Entry
DNR44_015230      CDS       T06390                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
play  Planomicrobium sp. Y50
Pathway
play03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:play00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DNR44_015230 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:play03400]
    DNR44_015230 (uvrA)
DNA repair and recombination proteins [BR:play03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DNR44_015230 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DNR44_015230 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 RsgA_GTPase AAA_23 nSTAND1 AAA_21 AAA_33 nSTAND3 AAA_22 NACHT DnaJ_CXXCXGXG AAA_24 ATPase_2 RNA_helicase cobW Viral_helicase1
Other DBs
NCBI-ProteinID: QHJ71885
UniProt: A0A7Z2S1N4
LinkDB
Position
complement(3042072..3044954)
AA seq 960 aa
MRNQEIKIQGARAHNLKNVDITIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYMRLMYARVGKA
ICPNHGIEISSQTIEQMVDRLVVYPERTKMQILAPLVSGRKGTHAKLFEDIKKQGYVRVR
VNGELFDLDDNIDLDKNKKHSIEVVIDRIVMKEGIAPRLSDSLESALRLSDGRVLVDVME
QEELLFSEHHACPICGFSIGELEPRMFSFNSPFGACPECDGLGHKLEVDPELVVPDWSLS
LNEHAVAPWKPSSSQYYPQLLKALCTHYKIDMDAPVSELPEEHMNLVLRGSGSEKIRFRY
ENDYGQIRDNHINFEGVLSNVDRRYRETSSDYTREQMEKYMAEQPCPACTGYRLKPESLA
VKVNGLHIGKVSEFSIVEADEFFKNLELSEKDMQISLLILREIKERLGFLINVGLDYLTL
NRASGTMSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLINTLKNMRDIGNT
LIVVEHDEDTMLAADYLIDIGPGAGVHGGEIIAAGTPEKVMKNRKSLTGQYLSGKKFIPL
PAERREPDGRAISIRGASENNLKKVDVDIPIGVFTAVTGVSGSGKSTLVNEILYKTLASK
LNKAKIKPGKAESVKGYEQLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVYAKTNEAK
VRGYQKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKD
KSIADVLAMTVEDAYSFFENVPKINRKLKTIVDVGLGYVTMGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHADDISRLLKVLQKLVDNGDTVLTIEHNLDVIKTADYLI
DLGPEGGDKGGTILATGTPEEIAEVENSYTGKYLKPILERDRARMEAKVNKASRRKKVAK
NT seq 2883 nt   +upstreamnt  +downstreamnt
ttgagaaatcaagagataaagatacagggcgcacgagcgcataacctgaaaaacgttgat
ataaccatcccgcgtgataaattggtcgttatgacgggtctatcgggatcagggaaatct
tcacttgccttcgatacgatttatgcggaaggacagcgtcgctatgtagagtcgctgtcc
tcttatgcacgtcagttcctagggcagatggataagccggatgtggatttgatcgaaggt
ttgtcgccggcgatttcgatcgaccagaaaacgacaagcaaaaatccgcgttcgacggtc
gcgaccgttacggaaatctacgactatatgcgccttatgtatgcccgtgtcggtaaagca
atctgcccgaatcatggcatcgagatttcttcgcagaccatcgagcaaatggtggaccgg
ctggttgtctatcctgaacgcaccaaaatgcagattctggctccgcttgtctcaggtaga
aaaggcacgcacgccaaattatttgaagacattaaaaaacaggggtatgtccgtgtaaga
gttaacggcgaattattcgatctggatgacaatattgatcttgataaaaataaaaaacat
tcaatcgaagtggtcattgaccgcattgtcatgaaggaaggcatcgcaccgcggttaagt
gattcgcttgaatcagctttgcgtctgagtgacgggcgcgtgctggtggacgtaatggaa
caggaagaattattgttcagcgaacatcatgcctgtccgatctgtggattctcaatcgga
gaattggaaccccgcatgttttcattcaactctccgttcggagcctgtccggaatgtgac
ggactcggccataaactggaagttgatccggaactcgtcgtaccggattggagcctgtcg
ttgaacgaacatgccgttgctccgtggaaaccgagcagttcccaatactatccgcaatta
ctgaaagcattgtgcacccactataaaatcgatatggatgcaccggtcagtgaacttcca
gaagagcacatgaatctggttctgcgtggttctggaagtgaaaaaatccgattccgctat
gaaaatgattatggacaaatccgggacaaccacatcaattttgaaggggttttatcgaat
gtggaccgccgataccgggaaacctcatcagattatacccgtgaacagatggaaaaatac
atggctgaacagccatgtcctgcgtgcacgggttaccgcctgaaaccggaatcgctggca
gtgaaagtaaatggactgcatatcggtaaagtttcggagttctcgattgtcgaagcggac
gaattcttcaaaaacctggagctgtcggaaaaagatatgcaaatttctttattgattctc
cgggaaatcaaagagcggctcggcttcctgattaatgtcggactcgactacctgactttg
aacagggcttccggaaccatgtccggcggggaagcgcaacggatccgactggcgacgcaa
atcggttcccgcctgtcaggtgtcctttatatattggacgaaccatcaatcggccttcat
cagcgtgataacgacaggctgatcaatacattgaaaaatatgcgggatatcggcaatacc
ctgatagtagtcgagcacgatgaagacactatgcttgcagccgattatttgatcgatatc
ggtccgggtgcaggagtgcacggcggagaaatcatcgccgccggaactcctgagaaagtg
atgaaaaatagaaagtcgcttactgggcaatatttaagcggtaagaaattcataccgctt
cctgctgagcgcagagagccggatggacgtgcaatttcaatccgcggcgcaagtgaaaac
aatctgaaaaaagtggatgtcgacataccgatcggcgtatttacagcggtgaccggcgta
tcaggttccggtaagagtacgctggtcaatgaaatcctctataagacattggcgagcaaa
ctgaacaaagcgaaaattaaaccaggcaaagctgaatcggtaaaaggctatgaacagctg
gagaaagtcatcgacattgaccagtcaccgatcggccgtacacctcgttcaaatccagcg
acatatacaggggtttttgatgatattcgtgatgtctatgccaaaacgaacgaagcaaaa
gtcagaggctaccaaaaagggcgcttcagcttcaatgtcaagggcggtcgctgtgaagct
tgccgcggagatggtattattaaaatagaaatgcacttcctgcctgatgtttacgtaccg
tgtgaagtatgccacggcaaacgctataacagggaaacactggaagtgaagtataaagat
aagagcattgcggatgtattggcgatgacggttgaggatgcgtattcgtttttcgagaac
gtcccgaaaatcaatcgcaagctgaaaacgattgttgatgtcggccttggctatgttacg
atgggtcaaccggcaaccacattatccggtggtgaagcccagcgcgtgaaattggcatcg
gagcttcacaaacgttcaaacggcaaatccttctatattctcgatgagccgacaaccgga
ttgcatgcggatgatatttcccgcttgctgaaagtattgcagaaattggttgataacgga
gatactgttctgaccatcgaacacaatctggacgtcatcaaaacggcagactatctaatc
gatctcggaccggaaggtggagacaaaggcggtacaatcctggcgaccggaactccggaa
gaaattgctgaggttgaaaattcatacaccggcaagtacttgaagccaattctggaacgc
gaccgggcaagaatggaagcgaaagtgaacaaagcaagccgccggaaaaaagtagctaag
tga

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