Planomicrobium sp. Y50: DNR44_015230
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Entry
DNR44_015230 CDS
T06390
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
play
Planomicrobium sp. Y50
Pathway
play03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
play00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNR44_015230 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_015230 (uvrA)
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNR44_015230 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DNR44_015230 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
nSTAND1
AAA_21
AAA_33
nSTAND3
AAA_22
NACHT
DnaJ_CXXCXGXG
AAA_24
ATPase_2
RNA_helicase
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QHJ71885
UniProt:
A0A7Z2S1N4
LinkDB
All DBs
Position
complement(3042072..3044954)
Genome browser
AA seq
960 aa
AA seq
DB search
MRNQEIKIQGARAHNLKNVDITIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYMRLMYARVGKA
ICPNHGIEISSQTIEQMVDRLVVYPERTKMQILAPLVSGRKGTHAKLFEDIKKQGYVRVR
VNGELFDLDDNIDLDKNKKHSIEVVIDRIVMKEGIAPRLSDSLESALRLSDGRVLVDVME
QEELLFSEHHACPICGFSIGELEPRMFSFNSPFGACPECDGLGHKLEVDPELVVPDWSLS
LNEHAVAPWKPSSSQYYPQLLKALCTHYKIDMDAPVSELPEEHMNLVLRGSGSEKIRFRY
ENDYGQIRDNHINFEGVLSNVDRRYRETSSDYTREQMEKYMAEQPCPACTGYRLKPESLA
VKVNGLHIGKVSEFSIVEADEFFKNLELSEKDMQISLLILREIKERLGFLINVGLDYLTL
NRASGTMSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLINTLKNMRDIGNT
LIVVEHDEDTMLAADYLIDIGPGAGVHGGEIIAAGTPEKVMKNRKSLTGQYLSGKKFIPL
PAERREPDGRAISIRGASENNLKKVDVDIPIGVFTAVTGVSGSGKSTLVNEILYKTLASK
LNKAKIKPGKAESVKGYEQLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVYAKTNEAK
VRGYQKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKD
KSIADVLAMTVEDAYSFFENVPKINRKLKTIVDVGLGYVTMGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHADDISRLLKVLQKLVDNGDTVLTIEHNLDVIKTADYLI
DLGPEGGDKGGTILATGTPEEIAEVENSYTGKYLKPILERDRARMEAKVNKASRRKKVAK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatcaagagataaagatacagggcgcacgagcgcataacctgaaaaacgttgat
ataaccatcccgcgtgataaattggtcgttatgacgggtctatcgggatcagggaaatct
tcacttgccttcgatacgatttatgcggaaggacagcgtcgctatgtagagtcgctgtcc
tcttatgcacgtcagttcctagggcagatggataagccggatgtggatttgatcgaaggt
ttgtcgccggcgatttcgatcgaccagaaaacgacaagcaaaaatccgcgttcgacggtc
gcgaccgttacggaaatctacgactatatgcgccttatgtatgcccgtgtcggtaaagca
atctgcccgaatcatggcatcgagatttcttcgcagaccatcgagcaaatggtggaccgg
ctggttgtctatcctgaacgcaccaaaatgcagattctggctccgcttgtctcaggtaga
aaaggcacgcacgccaaattatttgaagacattaaaaaacaggggtatgtccgtgtaaga
gttaacggcgaattattcgatctggatgacaatattgatcttgataaaaataaaaaacat
tcaatcgaagtggtcattgaccgcattgtcatgaaggaaggcatcgcaccgcggttaagt
gattcgcttgaatcagctttgcgtctgagtgacgggcgcgtgctggtggacgtaatggaa
caggaagaattattgttcagcgaacatcatgcctgtccgatctgtggattctcaatcgga
gaattggaaccccgcatgttttcattcaactctccgttcggagcctgtccggaatgtgac
ggactcggccataaactggaagttgatccggaactcgtcgtaccggattggagcctgtcg
ttgaacgaacatgccgttgctccgtggaaaccgagcagttcccaatactatccgcaatta
ctgaaagcattgtgcacccactataaaatcgatatggatgcaccggtcagtgaacttcca
gaagagcacatgaatctggttctgcgtggttctggaagtgaaaaaatccgattccgctat
gaaaatgattatggacaaatccgggacaaccacatcaattttgaaggggttttatcgaat
gtggaccgccgataccgggaaacctcatcagattatacccgtgaacagatggaaaaatac
atggctgaacagccatgtcctgcgtgcacgggttaccgcctgaaaccggaatcgctggca
gtgaaagtaaatggactgcatatcggtaaagtttcggagttctcgattgtcgaagcggac
gaattcttcaaaaacctggagctgtcggaaaaagatatgcaaatttctttattgattctc
cgggaaatcaaagagcggctcggcttcctgattaatgtcggactcgactacctgactttg
aacagggcttccggaaccatgtccggcggggaagcgcaacggatccgactggcgacgcaa
atcggttcccgcctgtcaggtgtcctttatatattggacgaaccatcaatcggccttcat
cagcgtgataacgacaggctgatcaatacattgaaaaatatgcgggatatcggcaatacc
ctgatagtagtcgagcacgatgaagacactatgcttgcagccgattatttgatcgatatc
ggtccgggtgcaggagtgcacggcggagaaatcatcgccgccggaactcctgagaaagtg
atgaaaaatagaaagtcgcttactgggcaatatttaagcggtaagaaattcataccgctt
cctgctgagcgcagagagccggatggacgtgcaatttcaatccgcggcgcaagtgaaaac
aatctgaaaaaagtggatgtcgacataccgatcggcgtatttacagcggtgaccggcgta
tcaggttccggtaagagtacgctggtcaatgaaatcctctataagacattggcgagcaaa
ctgaacaaagcgaaaattaaaccaggcaaagctgaatcggtaaaaggctatgaacagctg
gagaaagtcatcgacattgaccagtcaccgatcggccgtacacctcgttcaaatccagcg
acatatacaggggtttttgatgatattcgtgatgtctatgccaaaacgaacgaagcaaaa
gtcagaggctaccaaaaagggcgcttcagcttcaatgtcaagggcggtcgctgtgaagct
tgccgcggagatggtattattaaaatagaaatgcacttcctgcctgatgtttacgtaccg
tgtgaagtatgccacggcaaacgctataacagggaaacactggaagtgaagtataaagat
aagagcattgcggatgtattggcgatgacggttgaggatgcgtattcgtttttcgagaac
gtcccgaaaatcaatcgcaagctgaaaacgattgttgatgtcggccttggctatgttacg
atgggtcaaccggcaaccacattatccggtggtgaagcccagcgcgtgaaattggcatcg
gagcttcacaaacgttcaaacggcaaatccttctatattctcgatgagccgacaaccgga
ttgcatgcggatgatatttcccgcttgctgaaagtattgcagaaattggttgataacgga
gatactgttctgaccatcgaacacaatctggacgtcatcaaaacggcagactatctaatc
gatctcggaccggaaggtggagacaaaggcggtacaatcctggcgaccggaactccggaa
gaaattgctgaggttgaaaattcatacaccggcaagtacttgaagccaattctggaacgc
gaccgggcaagaatggaagcgaaagtgaacaaagcaagccgccggaaaaaagtagctaag
tga
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