Candidatus Portiera aleyrodidarum TV: PalTV_110
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Entry
PalTV_110 CDS
T02521
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pld
Candidatus Portiera aleyrodidarum TV
Pathway
pld03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pld00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PalTV_110 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pld03021
]
PalTV_110 (rpoA)
03400 DNA repair and recombination proteins [BR:
pld03400
]
PalTV_110 (rpoA)
Enzymes [BR:
pld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PalTV_110 (rpoA)
Transcription machinery [BR:
pld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PalTV_110 (rpoA)
DNA repair and recombination proteins [BR:
pld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PalTV_110 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF22
SpoIIAA-like
Selenoprotein_S
Motif
Other DBs
NCBI-ProteinID:
AGI27104
UniProt:
A0A8D3X810
LinkDB
All DBs
Position
complement(113119..114096)
Genome browser
AA seq
325 aa
AA seq
DB search
MSSVKEFIRPSNIKVEEISKNHAKIVLEPFERGFGHTLGNALRRIMLSSMQGCAVIEAEI
KGVQHEYSVIEGIKEDVIEIILNIKEIAIKMYGRDDVELLLNKLGPGVVKAGDITLSQDV
EIINPDQIIAHLNDHGEINMKLRIVRGMGYEPADIRKKADMKIGRIPIDANFSPVRRVAY
FVEAARVEQNTDLDKLIIELETNGTVDPEEAIRMSATILRNQLDAFVDLSCEKKQEVEVE
RRKDKKIDHALLLPVDDLELTVRSANCLKAENIYYIGDLVKRTEVELLKTPNLGKKSLNE
IKKVLKIRGLSLGMHIDLWPPGKKN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagttaaagagtttattcgtcctagtaatataaaagtagaagagattagtaaa
aatcatgcaaaaatagttttagaaccatttgaacgtggatttggtcatacattagggaac
gcattgcgccgtattatgttatcttcgatgcaaggatgtgcagttatagaagcagaaata
aagggtgtgcaacatgaatatagtgtaatagaaggtataaaagaagatgtaatagaaatt
attcttaatattaaagaaattgcaataaaaatgtatggtcgtgatgatgtagagttatta
ttaaataaattaggtccaggggtagtaaaagcaggagatataacgttaagtcaggatgta
gagataataaatccagatcagattattgcacatttaaatgatcatggagaaattaatatg
aaattacgtattgttagaggaatggggtatgaaccagctgatatacgtaagaaagcagat
atgaaaattggtcggataccaatagatgcaaattttagtccggttaggagagtagcatat
tttgtagaagcagcaagagtagaacaaaatactgatttggataagttaataatagagtta
gaaacaaatggaacagtagatccagaagaagcaatacgtatgtcggcaactattttaaga
aatcaattagatgcttttgttgatttatcatgtgaaaaaaaacaagaggtagaagtggaa
aggagaaaagataaaaaaatagatcatgctttacttttaccagttgatgatttggaatta
acagttagaagtgcaaattgtcttaaggcggaaaatatttattatattggcgatttagtt
aaaagaacagaagtggaattattaaaaacacctaatcttggaaaaaaatcattaaatgaa
attaaaaaggttttaaagattagaggtttatcattaggaatgcatattgatttatggcca
cctggaaaaaaaaattaa
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