Paenibacillus lentus: EIM92_07390
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Entry
EIM92_07390 CDS
T05914
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plen
Paenibacillus lentus
Pathway
plen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIM92_07390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plen03021
]
EIM92_07390
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_07390
Enzymes [BR:
plen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EIM92_07390
Transcription machinery [BR:
plen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EIM92_07390
DNA repair and recombination proteins [BR:
plen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EIM92_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AZK46049
UniProt:
A0A3Q8S4C3
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All DBs
Position
1648061..1649005
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKILEIDAEGEGVITAGDIRADSDVEI
LNPDLHIATLEPGSRLHMRIFAGRGRGYVQADRNKRDDQPIGVIPVDSIYTPIARVNYVV
ENTRVGQVTNYDKLTLEVWTDGSIKPEEAVSLGAKILTEHLYLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLDELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaattgagaccgtagaagttaacgatgatggcacctat
gggaaatttgtagtagaaccacttgagcgtggatatggcaccactctgggtaactcgctg
cgtcggattttgctctcttctctaccgggtgcagcggtaacctcggtccagatcgatggc
gttctgcatgaattttcgaccgttccaggtgtaatggaagacgttacggagatcattctg
aatctgaaagctctctctctcaaaatccattcggacgaggagaaaatccttgagatcgat
gcggaaggcgaaggagttattacggcaggtgatatccgtgcggatagcgatgtagaaatt
ttgaatcctgatttgcatattgctacgcttgagccgggatcaagacttcacatgcgcata
ttcgcaggccggggacgcggttatgttcaggcagatcggaataaacgagatgatcaacca
attggtgtcattcctgttgattcgatctataccccgattgcacgtgtcaactacgttgta
gagaatacgcgtgttggccaagtgaccaactacgacaagcttacgcttgaagtgtggaca
gacggtagtatcaaaccagaagaagcggtaagcctcggagctaagattttgaccgagcac
ctttacctgttcgtgggtctcacggacgaggcgaaggacgcggaaatcatggtggagaag
gaagaagataagaaagagaaagtgcttgagatgaccatcgaagagctagatctttctgtt
cgctcctataactgcctcaaacgtgccggtatcaataccgtgcaggagctgacgacgaaa
accgaagaagatatgatgaaggttcggaaccttggacgcaaatctttggaggaagtccaa
gagaagctggatgagcttggactcggacttcgtacggaagaatag
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