Pleomorphomonas sp. SM30: OHA_1_02822
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Entry
OHA_1_02822 CDS
T05766
Name
(GenBank) putative assembly protein
KO
K06236
collagen type I alpha
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pleo00536
]
OHA_1_02822
Glycosaminoglycan binding proteins [BR:
pleo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
OHA_1_02822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsmA
AsmA_2
DUF748
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
BBE73213
LinkDB
All DBs
Position
1:complement(3077349..3081389)
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AA seq
1346 aa
AA seq
DB search
MVRIVAGLFALLAILVVAVLAVPFVVPADWIRAQVVAAVEGATGFRLALDGPVSFTLVPE
PALEAVDVGVAAGDAPEFARVGTVRFGLALAPLIDRRVEVTGLTLQSPRLVLTVDADGHR
NWVPAMAAGKAAAPSAEPAASGGGFALSVARFAVEDGSVSWTDERSGVSEVVERIAVETA
LADLAAPLTARGGLALRGVPLAFDATLASPATLIAGGSADVRLALSAEALVVGFDGVVDA
RAATARGRLTAGSDDLIGFAALAGLPKPPFRALDVSGDVAAGADRVDLGGLKAEIDGIAV
TGGVSVALPAGARPRIDARLAVPDLDLDRAADRFADAREEDGRAAPGGDPRLDPAVLGVV
DGGLDLTVGAIRGAALGDAGTLDGLHLVVVAEGGAATAVLDGVRLAGGSLALRVKARPDG
ERLRLDGSVAAKGFDVGALARLAGAGSPLAGKLGADLAFAAAGRTASALAESLDASGTVT
LAGGSFAGTGLAGLFGDPAADRAEAIAVKATIASLGKPVRAEGTLGLAGRPFGFDATVDA
RRVLDGHAFPLAVRVTGGKVGLGFDGDVLPAEGAASGRIELRAPSLGALAAVLGRPAEGL
PAGALAVTAAIDASARSVAVDGLQVKLGDGGFSGDVSLDFGARPRVGARLRGPLIDIGGM
IAGAAGAAGPGAPTAATAADWSDAPLGLEGLRAFDADVSLSADALRYGALTSGPAEARIT
VAGGKLAVDLPSVALHRGTLTGRVGVDATDAAAAVDVAVRLERVDLAPVLAATLGTGRIG
GRASADLSIRGTGGSVRALMRDLAGTASVRVEGGALLGIDVRALLASAASAIVNGLGASP
DASTPFTTLAASFDVARGVATTADLALDAPALTARGAGRIDIGGKALALTVTPKLTAPGG
GDALSFEVPVVIEGPWASPRIYPDVADILSDPAAAYAKLSRMGGAFAALAGAGVGAGGAG
DLGAVFDRLAPGLGGALAGGAGGSGVVAPDLGALLPGGTGAAGDVGLDDLLGALGGAAPP
IPTGDPAPLRPNDPGAADPGPIDPGVAEPRPIEPGVVDPGPGDPGSVPGGDAVAGDSGPA
VVGGIPVPRPRPGPRPPVDDAVPGGDVGNPAPNDDVPLPGNDQPRPEKPQKPAKPQKPGK
PVPDDGAPQPNDVVPLPGGEQPRPEKPQKPGKPQKPGKPAPDDGAPQPNDVAPLPAGEEP
RPEKPQKPVKPAPETPDDGAPTPNDGGSAPGNDQPRPEKPQKPAKPQKPGKPAPDAAEPA
PNDGAAAPGDDQPPAEKPQKPRKPKPAVPAAADPASEPAVPAEAAPAAGSAAPAPAPADD
CAGDPARRCGDAVDPLQQLIDGAAGQ
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggtacggatcgtcgccggcctgttcgcgctgctcgcgatcctcgtggtcgccgtcttg
gcggtgcctttcgtggtgccggccgactggatccgcgcccaggtggtggcggcggtcgag
ggcgccaccggcttccgcctcgcgctcgacggtccggtctccttcacgctggtgcccgag
ccggccctcgaggcggtcgacgttggcgtcgccgccggcgacgcgccggagttcgcccgc
gtcggcaccgtccgcttcggcctcgcgctcgccccgctcatcgaccgccgcgtcgaggtc
acggggctgacgctgcagagcccgcgcctcgtcctcaccgtcgatgccgacggccaccgc
aactgggtcccggccatggcggccgggaaggccgcggcgccgtcggccgaaccggcagcg
tccggcggcggcttcgcgctctccgtcgcgcgcttcgccgtcgaggacggctcggtgagc
tggaccgacgagcgctccggcgtctccgaggtggtcgagcgcatcgcggtcgagaccgcg
ctcgccgacctcgccgcaccgctgaccgcccgcggcggcctcgcgctccgcggcgtgccg
ctcgccttcgacgcgaccctcgcctcgccggcgacgctgatcgccggcggcagcgccgac
gtccggctcgcgctctcggccgaggcgctcgtggtcggcttcgacggcgtggtcgacgcc
cgcgccgccaccgcccgcggccgtctgaccgccggctccgacgacctgatcggcttcgcc
gcgctggccggcctgccgaagccgccgttccgcgcgctcgacgtctccggcgacgtcgcg
gccggtgccgaccgcgtcgacctcggcgggctgaaggcggagatcgacggcatcgccgtc
accggcggcgtctcggtggcgctgccggccggggcgcggccccggatcgacgcgcgcctc
gccgtgccggacctcgacctcgaccgcgccgccgaccgcttcgcggacgcccgcgaggag
gatggccgcgccgcgccgggcggcgatccccgcctcgatcccgccgtgctcggcgtggtc
gacggcggcctcgacctcaccgtcggcgcgatccgcggcgcggcgctcggcgacgccggt
acgctcgacggcctccacctcgtcgtcgtcgccgagggcggcgccgcgaccgcggtgctc
gacggcgtccgcctcgccggcggcagcctcgcgctgcgggttaaggcgcggccggacggt
gaacgcctgcgcctcgacggcagcgtcgccgccaagggcttcgacgtcggcgccctcgcc
cgtctcgccggtgccggttccccgctcgccggcaaactcggcgccgacctcgccttcgcc
gccgccggccgcaccgcctccgccctcgccgagagtctcgacgcctccggcacggtgacg
ctcgccgggggcagcttcgccggcaccggcctcgccggcctgttcggcgaccccgccgcc
gaccgcgccgaggcgatcgcggtcaaggccaccatcgcctcgctcggcaagccggtgcgt
gccgagggcacgctcggtttagccggccggcccttcggtttcgacgccaccgtcgacgcc
cgccgtgtgctcgacggccacgcctttccgctcgcggtccgcgtcactggcggcaaggtc
gggctcggcttcgacggcgacgtgctgcccgccgagggcgccgcctcgggccggatcgag
ctccgcgccccctcgctcggcgccctcgccgccgtgctcggtcggcccgccgagggcctg
cccgccggtgctctcgccgtcaccgccgcgatcgacgcctcggcgcgctcggtcgcggtc
gacggcctccaggtgaagctcggcgacggcggcttttccggcgacgtctcgctcgacttc
ggcgctcgtccgcgggtgggtgcccggctgcgcggaccgctcatcgacatcggcggcatg
atcgcgggcgccgcgggcgccgccggccccggcgctcccaccgcggcgaccgcggcggac
tggagcgacgccccgctcggcctcgagggtctgcgcgccttcgacgccgacgtctccctc
tctgccgacgccctgcgctacggcgcgctgaccagcggccccgccgaggcgcggatcacc
gtcgccggcggcaagctcgcggtcgacctgccgtcggtggcgctgcaccgcggcaccttg
accggtcgcgtcggcgtcgacgccacggacgctgccgccgcggtcgacgtcgcggtgcgt
ctggagcgggtcgaccttgcgcccgtgctcgccgccaccctcggcaccggccggatcggc
ggccgcgcctcggccgatctttcgatccgcggcaccggcggctcggtgcgggcgctgatg
cgcgatctcgccggcaccgcgtcggtgcgggtcgagggcggcgcgctgctcggcatcgac
gtgcgcgcactgctcgcctcggcggcgagcgcgatcgtgaacggcctcggcgcctcgccc
gacgcgagcacccccttcaccaccctcgccgccagcttcgacgtcgcgcgcggcgtcgcc
accaccgccgacctcgccctcgacgcgccggcgctgaccgcgcgcggcgccggccgcatc
gacatcggcggcaaggcgctggcgctgaccgtgacgccgaagctgacggcacccggtggc
ggcgacgcgctctccttcgaggtcccggtggtgatcgaggggccctgggcgtccccgcgc
atctatcccgacgtcgccgacatcctgtccgatcccgcggcggcctatgccaagctgtcg
cgcatgggcggcgccttcgcggcgctcgcgggcgccggggtcggcgcaggcggagcgggc
gatctcggcgcggtgttcgaccggttggcgcccggcctcggcggcgcgctcgccggcggt
gcgggcggttcgggggtggtcgcgcccgatctcggcgcgctcctgcccggcggcaccggc
gcggccggcgacgtcggtctcgacgacctgctcggcgccctcggcggcgccgcgccgccg
atcccgaccggcgaccctgcgcccctccggccgaacgatccgggtgcggccgatcccggc
ccgatcgatccgggcgtggccgaaccgaggccgatcgagcccggcgtggtcgatcccggt
cccggcgatccgggctccgttcccggcggcgacgccgtggccggcgattccggccccgcg
gtggtcggcggcattccggtcccgcgtccccgccccggcccgcgcccgccggtcgacgac
gccgtcccgggcggcgacgtcggcaatcccgcgccgaacgacgacgtgccgcttcccggc
aacgatcagccgcgcccggaaaagccgcagaagccggccaagccgcagaaaccggggaag
cccgtgcccgacgacggagcgccgcagccgaacgacgtcgttccactccccgggggcgaa
cagccgcgcccggagaagccgcagaagcccggcaagccgcagaagccggggaagcccgcg
cccgacgacggggcgccgcagccgaacgacgtcgcgccgctcccggcgggcgaagagccg
cgcccggagaagccgcagaagccggtcaagcctgctcccgaaacacccgacgacggcgct
ccgacaccgaacgacggcggatcggcgcccgggaacgatcagccgcgtccggaaaagccg
cagaagccggccaagccgcagaagccggggaagcctgcgcccgatgccgccgaaccggcg
ccgaacgacggggcggccgcgcccggcgacgaccagccgccggcggagaagccgcagaaa
ccccgcaagccgaagccggccgtgcccgccgcggccgaccctgcctccgaaccggccgtc
cccgccgaagcggcgccggccgcaggctcagccgcgcccgcgccggctcccgccgacgac
tgcgccggcgatccggcccggcgctgcggcgacgcggtcgacccgctgcagcagctgatc
gacggtgccgccgggcagtag
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