Pantoea ananatis LMG 5342: PANA5342_0147
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Entry
PANA5342_0147 CDS
T01728
Symbol
rfaC
Name
(GenBank) ADP-heptose:LPS heptosyl transferase I
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00540
Lipopolysaccharide biosynthesis
plf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PANA5342_0147 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
PANA5342_0147 (rfaC)
Enzymes [BR:
plf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
PANA5342_0147 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
Core region
PANA5342_0147 (rfaC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
CCF07540
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Position
complement(162550..163518)
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AA seq
322 aa
AA seq
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MHVLIVKTSSMGDVLHTLPALTDAMNALPGIRFDWVVEENFAQIPTWHPAVDKVLPVAIR
RWRKHWFGSLQREERVRFKRELQSRDYDIVIDAQGLIKSAALVTRLAKGVKHGLDNRSAR
EPFASWWYDKKHEISKQQHAVERTRELFAKSLGYDKPPSQGDYAIAGHFLKPLSQHESPY
LVFLHATTRDNKHWPESHWRELIERVRPAGLRVKLPWGAEHEHQRALRLAEGFEHVEVLP
KLSLEAVAQQLAGADAVVSVDTGLSHLTAALDRPNITLYGPTDPGLIGGYGQNQFVLKST
DNNLNSITPEKVSNALGPLLDK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcctgatcgtcaaaacctcctccatgggagacgtcctgcatacgctgccagca
ctcaccgatgccatgaatgccctgcccggaatacgctttgactgggtggtggaagaaaat
tttgcacaaatcccgacctggcatccggcagtggataaggttctgcctgtcgccattcga
cgctggcgtaaacactggtttggcagcctgcagcgtgaagagcgcgtgcgtttcaagcgt
gagcttcagtctcgtgactacgacatcgtgatcgacgctcaggggctgattaagagcgcc
gcgcttgtgactcgtctggctaaaggcgttaagcacggcctggacaatcgtagtgcgaga
gaacctttcgccagctggtggtacgacaaaaaacacgagatcagcaagcaacaacatgca
gtcgagaggacgcgtgagctgtttgctaaaagtctgggttacgataaacccccgtctcag
ggggattatgcaattgccggccattttctgaagcccttatcacagcatgagagcccttat
ctggtatttcttcatgccactacccgtgataacaagcactggccagaatctcactggcga
gagttgattgaacgtgtccggccagcgggcttgcgtgtaaagctgccgtggggcgctgaa
catgaacatcagcgtgcgctgcgtctggctgaaggttttgagcacgtagaagtcttgcct
aagctttctcttgaagccgtagcacagcagttggcaggcgcagatgccgtagtgtcggta
gatacagggctgagccatctgaccgccgcgctggacaggcccaatatcacgttatatggc
cccaccgatccgggtttgattgggggttatgggcaaaatcagttcgtactcaaatccact
gataacaatcttaacagtattactccagagaaggtgtcaaacgcgctcggtccgttactc
gacaaataa
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