KEGG   Pantoea ananatis LMG 5342: PANA5342_1079
Entry
PANA5342_1079     CDS       T01728                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K02688  transcriptional regulator, propionate catabolism operon regulatory protein
Organism
plf  Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:plf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plf03000]
    PANA5342_1079
Transcription factors [BR:plf03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PANA5342_1079
SSDB
Motif
Pfam: Sigma54_activat PrpR_N Sigma54_activ_2 HTH_8 AAA_5 AAA_2 PAS_8 Mg_chelatase HTH_50 DUF87 AAA_3 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: CCF08472
LinkDB
Position
1119298..1121256
AA seq 652 aa
MTPVNISFIVILILDEIASDKSESSMKSNEIVIFSVSKTITQRILNVLIEKQLELPVYET
GYSEVLDKANEMIRSGTKIIISRGGTAALLRSNVTIPVIEIAHDFHGIYRILKQAKNKSQ
KIAAVGFPQFCNALKHYQNMTNENLKICQVYNHYDIESVVKNLAENNYKVVIGGLTVAEM
AKKYDLNVVMGDTDNNSIEQAINEAFSLLKYIHQESLKLDMSYSAMNQSREGIMCIDQMG
EVVSINNRGKTLFQCHAGDKIYRKDAFKEVYRSIIDESDVKEMIVELDGDFICTSIKHYT
KRQDGYSIVTGFIQGKSQWRNSADKKIKQQGFYTRYAFDDIIGHSASINIAIDKAKLCAR
HDAPIHILGDTGTGKELFAQSIHHHSIRKHGPFIAVNCAAIPENLLESELFGYAEGAFTH
ARKGGKPGVFEMAMKGTVFIDEISEAPLNVQVKLLRVLQEKQFVRLGGEALIAADFRLIT
ASNKDLHVLVQSGVFRQDLYYRINILELRLPALAEREGDIELLARHLLHQQGKEIAFTPD
ALDVLRRHSWPGNIRELQSVIYRLAVFHDRDVVDKDELLRAVRVADDFGSASQQSLLCEP
AESETHLLKKQEKHLITRIITQTQGDKVRAAAILGISPTTLWRKLKEYDLNS
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgacgcctgtcaatatctcattcatcgttatccttatactcgatgaaatagcgagcgac
aaaagcgaatcttcaatgaagtctaatgaaatcgtcattttctccgtttcaaaaaccatc
acccaacgcattttaaatgttcttattgaaaagcagcttgaactgccagtgtacgaaacg
ggctattcagaagtattagataaagcaaatgaaatgattcggtctggaacgaaaatcatt
attagtcgtggcgggactgccgcgcttcttcgcagcaatgtgaccattccggtgatcgag
atagcgcatgattttcatggcatttatcgtattcttaagcaggcgaaaaataaatcgcaa
aaaattgctgcggtaggttttccccaattttgtaacgcgctcaagcattaccaaaacatg
accaatgaaaatttaaaaatctgtcaggtctataatcactatgacatcgaaagtgttgtg
aaaaatcttgcagaaaataactacaaagtcgttataggcggtcttacggttgcagagatg
gcgaagaaatatgacctcaatgttgtgatgggggacacggataataattcaattgagcaa
gccatcaacgaggccttcagtttgctgaaatatatccatcaggaaagtctgaagttggat
atgagctattccgcgatgaatcagtctcgtgaaggcattatgtgcattgaccaaatgggg
gaggtggtgagcattaacaaccgagggaaaaccctttttcagtgtcatgctggcgataaa
atttaccgcaaagacgctttcaaagaggtttatcgctcaattatcgatgagtcagacgta
aaggaaatgatcgtagaactcgacggtgattttatctgtacctcaataaagcattacacc
aagcgccaggatggctattccatcgttaccgggtttattcaggggaagagccagtggcga
aacagtgcagacaaaaagataaaacagcaaggtttttatactcgctacgcttttgatgac
attattggtcattcagccagcattaacatcgcgattgataaagccaagctgtgcgcgcgt
catgatgcccccattcatattttgggtgataccggcaccggcaaagaactctttgcgcag
agtattcatcatcacagcatccgaaaacatggcccctttatcgcagtcaattgtgctgcc
attcctgaaaacctcctggaaagcgagctgtttggctatgctgagggggcatttactcat
gcgcggaaaggtggcaagcccggcgtgttcgaaatggcgatgaagggaacggtttttatt
gatgagatcagcgaagcgccgctcaatgtgcaggttaaattactgcgtgtcctgcaggaa
aagcagtttgtccgtctggggggagaggcgctcattgcggcagactttcggctgattacc
gccagcaataaagatctgcatgttttggttcagtcgggcgtttttcgccaggatctttac
taccgaatcaatattctggaactcaggctgcctgcactggctgagcgcgaaggggatatt
gaattactggcgcggcatttactgcatcagcagggaaaagagatcgcgtttactccggat
gcgctggatgtcttaaggcggcacagctggccgggtaacatccgcgaattacagtcggtt
atctacaggctggccgtgtttcacgatcgcgatgttgtagacaaagacgaactgctcagg
gccgtgcgggttgccgatgattttggctctgccagccagcaatccctgctttgcgagcct
gcggagagtgaaacccatttgcttaaaaagcaggaaaaacaccttatcacgcgtatcatc
acccaaactcaaggggataaggtcagggcggcagccatccttggcatcagcccgaccacc
ctgtggcgtaagttgaaagagtacgatcttaacagctaa

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