Pantoea ananatis LMG 5342: PANA5342_4202
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Entry
PANA5342_4202 CDS
T01728
Symbol
nfi
Name
(GenBank) deoxyribonuclease V
KO
K05982
deoxyribonuclease V [EC:
3.1.21.7
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plf03400
]
PANA5342_4202 (nfi)
Enzymes [BR:
plf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.7 deoxyribonuclease V
PANA5342_4202 (nfi)
DNA repair and recombination proteins [BR:
plf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PANA5342_4202 (nfi)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endonuclease_5
UvrC_RNaseH_dom
DUF99
Motif
Other DBs
NCBI-ProteinID:
CCF11595
LinkDB
All DBs
Position
complement(4437740..4438408)
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AA seq
222 aa
AA seq
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MDIAALRAEQRQRAAEVVRQDDFDVLPPRFIGGADVGFEQEGAVTRAALVILEYPSMKLV
EYRIARIDTTMPYIPGFLSFREYPALLAAWDMLEQKPDLLFVDGHGISHPRRLGVASHFG
LMVDVPTIGVAKKRLCGHVEALDETPGSRQPLMDKGEQIGWVWRSKARCNPLFVATGHRV
SLDSALEWVEKCTQGYRLPEPTRWADAVASRRPAFLRWQSAL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgccgctcttcgcgcggagcaacgccaacgggccgcagaagtcgtacggcag
gatgattttgacgtgctgccgccacgctttattggtggcgcagacgtcggttttgagcag
gaaggcgcagtgacgcgtgcggcactggttattcttgaatatccgtccatgaagctggtg
gaatatcgcatcgcgcgcattgataccaccatgccttacattccgggctttctctctttc
cgtgagtatccggccctgctggcggcctgggacatgctggagcagaagcccgatctgcta
tttgtcgatggtcatggtatctcacatccgcgccggcttggtgtcgcgtcgcattttggg
ttgatggtggatgttcccactatcggtgttgcgaaaaagcgtctgtgcgggcacgttgag
gcgctggatgaaacgcccggcagtcggcagccgttgatggataaaggagaacaaattggc
tgggtatggcgcagcaaggcacgctgtaacccgctgtttgttgccaccggacaccgcgtc
agtctggacagcgctctggaatgggtagaaaagtgcacacagggctaccgtttaccggag
cccacgcgctgggcggatgctgtggcatctcgccgacccgcatttctgcgctggcaaagc
gcgctttaa
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