Paucimonas lemoignei: NCTC10937_01715
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Entry
NCTC10937_01715 CDS
T05492
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
plg
Paucimonas lemoignei
Pathway
plg03030
DNA replication
plg03430
Mismatch repair
plg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10937_01715 (holB)
03430 Mismatch repair
NCTC10937_01715 (holB)
03440 Homologous recombination
NCTC10937_01715 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plg03032
]
NCTC10937_01715 (holB)
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_01715 (holB)
Enzymes [BR:
plg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10937_01715 (holB)
DNA replication proteins [BR:
plg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10937_01715 (holB)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10937_01715 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
HolB_lid
nSTAND3
iSTAND
AAA_22
TsaE
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
SQF97601
LinkDB
All DBs
Position
1:1904348..1905334
Genome browser
AA seq
328 aa
AA seq
DB search
MAEAYPWQDQLWQQMAGRAQHAHAYLLHGPIGIGKRALAERLMATLLCQRPQGLDACGQC
KSCMLLAAGSHPDNYVLEPEEADKAIKVDQVRDLVSFVVQTAQMGGRKVVLIEPVESMNI
NAANALLKSLEEPSGNTVLLLVSHQSSRLLPTVRSRCVQQACPLPSEQMSLDWLAQALPE
CSEDQRRELLVLAAGSPLAAVKLQAQGVREQRAQVVDGVKKLLKQQQSPTQLAEGWKDIP
LLLLFDWFCDWSNLILRYQLTEDEEGLGLADMRKVLQYLGQKTAQGRVLEIQDWILAQRQ
KVMSKANLNRVLLLEALLVQWAAMPQQR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaggcctatccctggcaggaccagctctggcagcagatggccggacgcgcccag
catgcccacgcttatctgttgcacggccccattggtatcggcaagcgggcattggccgag
cgcttgatggccacgttgctgtgtcagcgcccgcaagggctggatgcttgcggccagtgc
aaatcctgcatgctgctggcggcaggcagccatcctgataattacgtgctggagcccgaa
gaggcggacaaggcgatcaaggtcgatcaggtccgtgatctggtgagctttgtcgtgcag
accgcgcaaatgggcggtcgcaaggtagtgttgatcgagcctgtggagtcgatgaacatc
aacgccgccaacgccttgttgaagagtctcgaagagccttcaggtaacactgtcctgctg
ctggtcagccaccagtcgagcagattgctgccgaccgtgcgaagccgctgtgtgcagcag
gcctgcccgttgcccagcgagcaaatgagtctggactggctggcccaggcgctgcccgag
tgcagtgaggatcagcggcgcgaattgctggtcctggcggcagggtcgccgttggcggcc
gtcaagcttcaggctcagggcgtgcgtgaacagcgtgctcaggtggtcgacggcgtcaag
aagctgctcaagcagcagcaatcgccaacccagttggctgaaggctggaaagatatcccg
ctgttgctgctgtttgactggttctgtgattggtcgaacctgattctgcgttaccaattg
accgaagatgaagaaggccttgggctggctgacatgcgcaaagttttgcaatacctgggg
cagaaaacggctcagggccgggtgctggagattcaggactggatcctcgcgcagcgtcag
aaagtcatgtccaaagccaacctcaatcgtgtgctgttgcttgaagccttgctggtgcag
tgggcagcgatgccccaacaacgttag
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