Candidatus Planktophila limnetica: PHILAsVB114_04365
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Entry
PHILAsVB114_04365 CDS
T05067
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plim03032
]
PHILAsVB114_04365
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_04365
Enzymes [BR:
plim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PHILAsVB114_04365
DNA replication proteins [BR:
plim03032
]
Prokaryotic type
DNA Topoisomerases
PHILAsVB114_04365
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PHILAsVB114_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
FtsL
Motif
Other DBs
NCBI-ProteinID:
ASY27872
UniProt:
A0A249LFL7
LinkDB
All DBs
Position
complement(830182..832278)
Genome browser
AA seq
698 aa
AA seq
DB search
MTFATVASKNIDANILQESYTAKDLAVLEGLDAVRKRPGMYIGSTDSRGLMHCLWEIIDN
SVDEALAGHCKKIEINLESDGSVEVHDDGRGIPVDKEPKTGLTGVEVVLTKLHAGGKFGG
GSYAASGGLHGVGASVVNALAVRLDAEVDRDGKIYWMSFQRGVAGIFDGDGPKAEFTPKS
GLRVIGKISAKVTGTRIKWWSDKQIFLKEAELDLEDVYARARQTSFLVPGLTLTVNDNRT
KTKTTESFYHKGGISEYCEFLQPDQPIGDVIRIYGTGHYQETVPVLDDKGHMVSTEVERD
MEVDIAMKWGNGFDNTQRSFVNIIATPKGGTHVLGFERAITKAFNEALRSTKTLKNNEAD
VIKDDIMEGLTAVVTVRMSEPQFEGQTKEVLGTAAATRIVSAVVADKMKEFFNTTRRIDK
ANGRLILEKVAGASRTRISARAHKDLQRRKNALESSSLPTKLSDCRSEDVNRTELFIVEG
ESALGTTKAARNSEFQAILPIRGKILNVQKASLSQMLDNSECASIIQVIGAGSGKSFELD
EARYGRIILMSDADVDGAHIRCLLLTLLYRYMKPMIDDGRVFAAIPPLHRIETMGAGGKK
GEYIYTYSDDEMRKVTGDLKKAGKKWKEPIQRYKGLGEMDADQLRETTMDPDARTLRRIT
IKDATAAEAMFELLMGNDVAPRKEFISTAEIDRDRIDA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
ataacctttgccaccgtggcctccaagaatattgatgcaaatatcttgcaggagagctat
accgcaaaagatttagcagtccttgaaggattagacgcagttcgcaaacgccccggaatg
tatatcggttcaaccgattcgcgtggccttatgcactgcttatgggaaattattgataac
tcagttgatgaagcactcgctgggcattgtaagaaaattgagattaatcttgaatcagat
ggttctgtagaagtacacgatgatggtcgcggtattccagttgataaagaaccaaagact
ggtcttactggtgttgaagttgttctaacaaagttacacgcaggcggtaaattcggtggc
ggttcttatgcggcctccggtggtctacacggcgttggcgcatcagttgttaacgcactt
gcagttcgcctcgatgccgaagttgatcgcgatggcaagatttattggatgtcttttcaa
cgcggtgttgcaggcattttcgatggcgatggaccaaaggcagagttcacaccaaaatct
ggattacgcgttattggcaaaatttcagccaaggtcacaggcacccgcattaagtggtgg
agtgataaacagatcttcttaaaagaagccgaacttgaccttgaagatgtatatgcgcgt
gctcgtcaaacatctttccttgttccgggattaactcttacagtcaatgataatcgcact
aaaacaaagaccacagaatctttttatcacaagggcggaatctccgaatactgcgaattc
ctacaacctgatcagccaataggcgatgtcattcgtatttacggtactggccactatcaa
gagacagttcctgtcctcgatgacaagggccatatggtttccacagaagtagagcgcgat
atggaagttgatatcgccatgaagtggggcaatggctttgataacactcagcgctcattc
gtaaacatcattgcaacacccaagggtggaacacacgttctgggcttcgaacgagcaatt
accaaggcatttaatgaagcgcttcgatccacgaaaacattgaaaaacaatgaagcagat
gttattaaagatgacatcatggaaggtttgaccgcagttgtgacagttcgcatgtcagag
ccacaatttgaaggacagacaaaggaagttcttggaacggctgctgccacacgaattgtt
tcagctgttgtggcagataaaatgaaagagtttttcaacaccacgcgccgaattgataag
gccaatgggcgtttaattcttgaaaaggttgccggagcatctcgcacccgtatttcggcc
cgcgcccacaaagatttgcaacgtcgaaagaatgctttggaatcctcatcccttccaaca
aagctctctgattgtcgatcagaggatgttaatcgcacagagttattcatcgtcgaaggt
gaatccgcactcggcaccacaaaagctgcacgcaactcagagtttcaagcaatcttgcct
attcgcggcaaaatcttaaatgtgcaaaaagcatcgctgtcacagatgctcgataactca
gagtgcgcatccattattcaagtaatcggtgcaggctctggaaaatccttcgaattagat
gaggctcgatatggtcgcattattttgatgtcagatgcggacgttgacggcgcgcacatt
cgttgtttattgctcacactcttgtatcgatacatgaagccgatgatcgatgatggtcgc
gtctttgcagcaatcccaccactgcaccgcattgaaacaatgggcgctggcggcaaaaag
ggtgaatacatctacacatactcagatgatgagatgcgcaaagtaacgggggatttaaag
aaggctggaaagaagtggaaagaaccaatccagcgatacaaaggccttggcgagatggat
gcagatcagttgcgcgagaccactatggatccagatgcacgcacacttcgccgcatcaca
attaaggatgccacagccgctgaagcaatgtttgaattgttaatgggcaacgatgttgca
ccgcgtaaagagtttatttctactgcagagattgatcgcgacaggatcgacgcttaa
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