Planococcus versutus: I858_009340
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Entry
I858_009340 CDS
T04421
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pll
Planococcus versutus
Pathway
pll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I858_009340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pll03019
]
I858_009340
03400 DNA repair and recombination proteins [BR:
pll03400
]
I858_009340
Enzymes [BR:
pll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I858_009340
Messenger RNA biogenesis [BR:
pll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I858_009340
DNA repair and recombination proteins [BR:
pll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I858_009340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Cellulase-like
Motif
Other DBs
NCBI-ProteinID:
ANU27192
UniProt:
A0A1B1S1X4
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All DBs
Position
complement(2932516..2934288)
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AA seq
590 aa
AA seq
DB search
MLESAKKLLQSHFGYESFRVGQEQAITQVFEGHNSICVMPTGGGKSMCYQIPALVMEGTT
IVVSPLISLMKDQVDALLAAGIPAAYINSSLGFDEVRETLMDVQRGAIKLLYIAPERLDS
EMFLNELQGVYVPLIAVDEAHCISQWGHDFRPSYRLISRMTELFPNNPTVLALTATATPQ
VREDICRILNIEEQHTIMTGFERPNLTFSVVRGQDRERFVKEYVAKNDNEAGIIYAATRK
TVDSVYEMLLKKGIKAAKYHAGMPDHERKSGQERFLNDEVTVMVATNAFGMGIDKSNIRF
VIHYQLPKNMESYYQEAGRAGRDGLPSECIVLYASQDVQTQRFLIDQAQDPSRIPGELFK
LQGMVDYCHTENCLQQFIIHYFGDSTAGPCGHCGNCVDDRESLDVTKDVQMVLSCVIRMG
QKFGKVMTAQVLTGSRNKKVLDFGFNKLSTYGILQHQNAKEVSNLIEFMISQELLAVEQG
SFPTIYVPDGGRDVLLGKRQVLRKGAVITKRIASNDPLFEELRVVRKKLADEAGVPPFVI
FSDKTLQDMVSRRPQNEEEFLEVNGVGANKLEKYGHAFLQAIHSFDAVNN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaagcgcaaaaaaattactgcagtctcattttggttacgaatcatttcgagtt
ggccaggaacaagccatcacgcaagtgtttgaaggccataattcgatttgtgtcatgcca
actggcggaggcaagtcgatgtgttaccaaattccagcgcttgttatggaaggaaccaca
attgttgtgtcacctttgatttcattgatgaaagaccaagttgatgcacttttagcagcg
ggtattccagctgcatatataaatagttctcttggtttcgacgaagttcgagaaacgtta
atggacgttcaacgcggcgccattaaactactctatatcgcaccagaacgattggattcg
gaaatgtttttgaatgaattgcaaggtgtttacgttccgttgattgcggtagacgaagcg
cattgtatttcgcaatggggacatgattttcgtccgagttaccgattaattagtcggatg
acagagttatttccaaacaatccaaccgtgttagcgttaactgcaacagccacaccacaa
gtacgtgaagacatatgccgaattttaaatattgaagaacaacacaccatcatgacgggt
ttcgagcgaccgaatctaacattttcagtggtgcgtggtcaagaccgtgaacggtttgta
aaggaatacgtagcgaaaaatgacaatgaagcaggtattatttacgcagcaacgcgcaaa
actgtagattcagtgtatgaaatgttgcttaaaaaaggcattaaagcagcaaaataccat
gctggtatgccagaccacgaaagaaaaagtggacaagagcgttttctaaatgatgaagtg
accgtgatggttgcgaccaatgcatttggtatgggcattgacaaatcgaatatccgcttt
gtgattcattaccagcttcctaaaaacatggagagctattatcaagaagcaggacgtgca
ggacgagatggtttgccgagtgagtgcattgtgctttatgcgtcgcaggatgttcaaaca
caacggttcttaatcgatcaagcacaagatcccagtcgaattccgggagagcttttcaaa
ttgcaaggaatggtcgattattgtcatacagaaaattgcttgcagcagtttatcattcat
tattttggagatagcacggcggggccatgtggacattgcggaaattgtgtagatgaccgt
gaaagcttagatgtcacgaaagatgttcaaatggttttgtcgtgtgtgattcgcatgggt
caaaaatttggaaaagtaatgacggcacaagtattaacaggatcacgcaataaaaaagta
ctagattttggatttaataaactgtcgacatacggcatcttgcaacatcaaaatgcgaaa
gaagtttcaaatttaatcgaatttatgatttctcaagaattattggctgttgaacaagga
tcgtttccgacaatttatgtgcctgacggcggtagagacgtcttgcttggcaagcggcag
gtgctgcgaaaaggtgcagtgataacgaagcgcattgcttcgaacgatcctttgtttgaa
gaattgcgagtggttcgcaaaaaactagctgacgaagctggtgtgccaccttttgttatt
ttttcagataagacgctgcaagatatggtttctagaagacctcaaaatgaagaagagttt
ttagaagttaatggagttggtgccaacaagcttgagaaatatggccacgcatttttacaa
gccattcattcttttgatgctgtaaacaactga
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