Planococcus versutus: I858_009350
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Entry
I858_009350 CDS
T04421
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
pll
Planococcus versutus
Pathway
pll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I858_009350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pll03019
]
I858_009350
03009 Ribosome biogenesis [BR:
pll03009
]
I858_009350
Messenger RNA biogenesis [BR:
pll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I858_009350
Ribosome biogenesis [BR:
pll03009
]
Prokaryotic type
rRNA helicases
I858_009350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
UvrD-helicase
Helicase_RecD
RuvA_C
Motif
Other DBs
NCBI-ProteinID:
ANU27194
UniProt:
A0A1B1S201
LinkDB
All DBs
Position
complement(2929893..2931338)
Genome browser
AA seq
481 aa
AA seq
DB search
MSNKKFSEYTISEQIVKALEGLGYTEPTEVQEKVIPVALSKTDLTVKSQTGSGKTAAFGI
PICELVDWEENKPQALILTPTRELADQVKEDVTNIGRFKRIKAAAVYGKQPFAYQQAELK
QKCHVVVGTPGRVLDHIERGTLNLERIEYLVLDEADEMLNMGFVEQVEAIINKLPKQHTT
MLFSATLPENVENLQQKYMIDPQHIEIASTDTLTDQIDHSLFIVAEQKKFALLRDVTIIE
NPDSCIVFCRTKDNVDFVMEQLEKHYYTCDKLHGGMLQEDRTAVMNDFKRGEFRYLVATD
VAARGIDIDNITHVINYDVPMEKESYVHRSGRTGRAGKTGKAISFVTPNEDKFLAEIEAY
IGFEISRRTAPSEAAVDAAMLDFTEKLESRPKLKKNKNEQVNKDILKLYFNGGKKKKLRA
FDFVGTLTSIPGVTAEDIGIIKIQDTVTYIDILNGKGPMVLKAMKDKTIKGKTLKVHKAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaaaatttagtgaatacactattagtgaacaaattgtcaaggcccttgaa
ggacttggctatacagaaccaacagaagtgcaggaaaaagtgattcctgttgcattgtca
aagactgacttaacagtaaagtctcaaacaggcagcggaaaaacagctgcctttggcatt
ccgatttgtgagttagttgattgggaagaaaacaaaccacaagcattgattttaacgcca
actcgtgaactagcagatcaagtaaaagaagatgtgaccaatattggccgttttaaacgc
attaaagcagcagctgtttatggaaaacaaccgtttgcttatcagcaggctgaactcaag
caaaaatgtcatgtagtggtaggcacgccgggacgcgtactcgatcatattgagcgtggt
acgttaaatttagagcggattgaatacttagttcttgatgaagcagacgaaatgttgaat
atgggatttgttgaacaagtagaagcaatcatcaacaaattaccaaagcaacataccaca
atgttattttctgcaacattacctgaaaatgtagagaacttacagcaaaaatacatgatt
gatccacaacatattgaaattgcttcgacagatacgttaacagatcaaattgaccactca
ttatttattgtggcagagcagaaaaaattcgctttgttgcgtgatgtgaccattatcgaa
aacccggacagttgcattgttttctgtcggacaaaagataatgtagattttgtcatggaa
caattggaaaaacattattacacatgtgataaattgcacggtggcatgttgcaagaagat
cgtacggcagtcatgaatgatttcaaacgcggagagtttcgttatttagtggcaactgat
gttgcggctcgtggaattgacatcgataacatcacgcatgtcattaactatgatgtgccc
atggaaaaagaaagctacgtgcatcgttcagggcgtacaggacgtgctggtaaaacagga
aaagccatttcatttgtaacgccgaacgaggataaatttttagcggaaattgaagcatac
atcggatttgaaatttcgcgtagaacagctccttctgaagctgctgttgacgcagcaatg
cttgattttacagaaaaactcgaaagtcgtcccaaattaaagaaaaataaaaacgaacaa
gttaataaagatattttaaaactatactttaatggtgggaagaaaaagaaattgcgtgca
tttgattttgtaggaacgttaacgagcattccgggagtaacagctgaagatattggtatc
attaaaattcaagatacggttacttatattgatattttaaatggtaaaggtccaatggtc
ttgaaagcgatgaaagataagacgataaaaggcaaaaccttaaaagtgcataaagcaaac
aagtaa
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