Planctopirus limnophila: Plim_4065
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Entry
Plim_4065 CDS
T01225
Name
(GenBank) type III secretion system inner membrane R protein
KO
K02421
flagellar biosynthesis protein FliR
Organism
plm
Planctopirus limnophila
Pathway
plm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Plim_4065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plm02044
]
Plim_4065
02035 Bacterial motility proteins [BR:
plm02035
]
Plim_4065
Secretion system [BR:
plm02044
]
Type III secretion system
Flagellar export apparatus
Plim_4065
Bacterial motility proteins [BR:
plm02035
]
Flagellar system
Flagellar assembly proteins
Type-III secretion
Plim_4065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_export_1
Motif
Other DBs
NCBI-ProteinID:
ADG69876
UniProt:
D5SY83
LinkDB
All DBs
Position
complement(5219733..5220737)
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AA seq
334 aa
AA seq
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MPALPWTEWLLTEATFQFQIFLLVLVRLSGLALTGPIFGAPAVPTNIRVLLIFVLALLVT
PSIGHQAAQGFSLRDGNQDQRLTSDEIPPALAERFLAESSNTPASAELSTPDDRVMTAAE
YSALPTPPENLGQLVLVLLGELVIGLFLGLGVQMVLAGLQMAGQIIDQQGGFGLGEVFNP
DLQMNASQSGQLLFWLGTVIFLVLEPLGGHLVMLKSMVESFQSIPVGRAFWEPGTVELLN
NLMQASFSLAIRFAAPIMLVMCLVDAAIGFLSHTVPQINIQAVGFSLKAMVSLLLLITLF
STSPAVIVNAFQETFFVLRQGLSLPEVITIPPSG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccggccttgccctggacagaatggctgctgaccgaagccacttttcagttccagatc
tttctgctggtgctggtcaggctctcaggcctcgcattgactggcccgatcttcggtgcc
cctgccgtgcccacgaatatccgcgtactgctgatttttgtactggcacttctcgtgaca
ccgtccatcggccatcaggcggctcaagggttttcgctgcgagatggcaaccaggatcag
cgattaaccagcgacgaaattcccccggcactcgctgagcgatttctcgcagagtcatca
aacacaccggcatctgccgagctttcgacgcctgatgatcgagtcatgacagccgcggaa
tactcagcacttcccacacctccagaaaacctggggcaactcgtgctcgtgcttctggga
gaactggtgatcgggttgttcttagggttgggtgtgcagatggtgctggctggtctgcag
atggcagggcagatcattgatcagcagggagggttcggactgggtgaagtctttaaccca
gacttgcaaatgaatgcctcgcaaagtgggcaactcctcttctggctggggacagtcatc
tttctggtgctcgaacctctgggcgggcatctcgtcatgttgaaatcaatggtcgagagt
tttcagtcgatcccggtgggacgggccttctgggagccgggaactgtggaactgttaaac
aatctgatgcaggcctcgttctcgctggccatacgctttgccgcacccatcatgctcgtg
atgtgcctggtcgatgccgccattggttttttgagccacaccgttccgcaaatcaatatt
caggccgtcgggttctcactcaaggccatggtgagcctgctcctgctgatcacacttttc
agtacctcgccggctgtcatcgtgaatgcgtttcaggaaacctttttcgtcttaaggcaa
ggactctccctgcctgaagtcatcacgattccaccctccggttaa
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