Pseudomonas lundensis: AA042_17405
Help
Entry
AA042_17405 CDS
T05473
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AA042_17405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_17405
Enzymes [BR:
plq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AA042_17405
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AA042_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOZ14230
LinkDB
All DBs
Position
complement(3841337..3842149)
Genome browser
AA seq
270 aa
AA seq
DB search
MRIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPFADIEALGYHVQFHGQK
GHYGVALLSRQAPLSINKGFATDEEDAQRRFIWGEFADENGQPVTIMNGYFPQGESRDHP
TKFPAKQRFYSDLQQLLESQFSNEQPLVVMGDINISPQDCDIGIGEVNAKRWLKTGKCSF
LPEEREWMERLKGWGLVDSFRYLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDVILTSQGL
VPRIKDAGVDYDLRAMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgtgtcattcaacatcaacggcctgcgcgctcggcctcatcagctggcagcg
ctgatcgaaaaacatcagccggacgtgatcggcctgcaagaaaccaaagtcagtgacgaa
cagttccctttcgctgacattgaagcgctggggtatcacgtgcagttccatggccagaaa
ggccattacggcgtcgcgctgctgtcccgtcaggcgccgctgagcattaataaaggcttt
gccaccgatgaagaggacgcccagcgccgcttcatctggggcgaattcgcggatgaaaac
ggtcagccggtgaccatcatgaacgggtatttcccacaaggtgaaagccgcgatcacccc
accaagttccctgccaagcaacgtttctatagcgatttgcagcagttgcttgaaagccag
ttcagcaacgaacagcctttggtggtcatgggcgacatcaatatctcgcctcaggattgc
gacatcggtatcggcgaagtcaacgccaaacgctggctgaaaaccggcaaatgcagcttc
ttgcccgaagaacgcgagtggatggagcgcctcaaggggtggggcctggtggacagcttc
cgctacctgtacccggacgtcaccgaccgcttcagctggttcgactaccgtagccgcggc
ttcgaagacgaacccaagcgcggcctgcgcatcgacgtgattctgacctcccaagggttg
gtgccgcgcatcaaggacgcaggcgtcgactacgacctgcgcgccatggaaaaaccatca
gaccatgcgccgatctggctagaactgagctga
DBGET
integrated database retrieval system
