KEGG   Planctomyces sp. SH-PL14: VT03_02425
Entry
VT03_02425        CDS       T04354                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pls  Planctomyces sp. SH-PL14
Pathway
pls00740  Riboflavin metabolism
pls01100  Metabolic pathways
pls01110  Biosynthesis of secondary metabolites
pls01240  Biosynthesis of cofactors
pls02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pls00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VT03_02425 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VT03_02425 (ribD)
Enzymes [BR:pls01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VT03_02425 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VT03_02425 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AMV16716
UniProt: A0A142WPY2
LinkDB
Position
575508..576608
AA seq 366 aa
MRRALELARRGRGLVEPNPMVGAVVVSPEGELVGEGNHERFGGPHAEVNALRAAGDRAGG
GTLYCTLEPCSHFGKTPPCAPLVVSSGIRRVVLGTGDPAPHVAGRGIAILREAGIEVIVG
VCEAEARQVVAPFVTLMTLGRPYVHAKWAMSLDGRIATRTGHSQWISNERSRARVHELRG
RMDAILVGRGTAVADDPLLTARPPGPRTPLRIVLDSTLQTPIDCQLVQTAQEFPTLVATT
SAADAVRREAFLARGVEVELFDAVPSAAADGSASPRVSIPALLSRLGQRKLTNLLVEGGG
DVLGAFHDAGLLDEYHVFVAPKIIGGASAKSPLGGFGTEQVMASGLSVVATESLDGDVYI
NAVQPR
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcggcgggcgctggagctggcccgccggggccgggggctggtcgaaccgaacccgatg
gtcggggccgtcgtggtctcgccggagggggaactggtcggcgagggaaaccacgagcgg
ttcggcgggccgcatgccgaagtgaatgccctccgggcggccggtgatcgcgcgggcggg
gggacgctttactgcaccctcgaaccctgttcgcatttcggcaagacgcccccgtgtgct
ccgctggtcgtgagctcggggatccggcgggtggtcctcggcacgggcgatcccgcgccg
catgtcgcgggtcgcggaatcgcgatcctccgggaggcggggatcgaggtcatcgtcggg
gtctgcgaggcggaagcgcggcaggtggtggcgccgttcgtcacgctgatgacgctcggc
cggccgtatgttcatgccaaatgggcaatgtcgctcgacgggcggatcgccacgcggacg
ggccattcgcagtggatctcgaacgaacgctcgcgggcgcgggttcatgagctgcgggga
aggatggacgcgatcctcgtcggccgcgggacggctgtcgcggatgatcccctgctgacg
gcccggccccccggcccgcggacgccgctgcggatcgtcctcgactcgacgcttcagacc
ccgatcgactgccagctcgtccagacggcgcaggagttcccgacgctcgtcgccacgacc
tccgccgcggacgcagtccgtcgcgaagcgtttcttgctcggggtgtcgaagtcgagctg
ttcgacgcggttccgagcgctgcggctgacggctccgcctcgccgcgggtctccattccc
gcgctgctgtcgaggctcggacagcggaagctcacgaaccttctcgtggaagggggcggg
gatgttctcggcgcgttccacgatgccggactgctcgacgagtaccacgtctttgtcgcc
cccaagatcatcggcggggcatcggcaaagtcgccgctcggcgggttcggaaccgagcag
gtgatggcgtccggtctctccgtcgtggcaacggaatcgctcgatggagacgtctacatc
aacgcggtgcagccacgatga

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