Planctomyces sp. SH-PL14: VT03_02460
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Entry
VT03_02460 CDS
T04354
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_02460 (phrB)
Enzymes [BR:
pls01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VT03_02460 (phrB)
DNA repair and recombination proteins [BR:
pls03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VT03_02460 (phrB)
Prokaryotic type
VT03_02460 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMV16723
UniProt:
A0A142WPL5
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All DBs
Position
complement(583494..584954)
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AA seq
486 aa
AA seq
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MAGSLLLFQNDLRIEDHPALHAARTEADWVCPLFVWSPADEKPWAPGAASRWWLHHSLLA
LQERLAGRGAPLVIRSGDVSETVQAIAKETGAESVYWSARYEPHTAALQSDLRKDLQKRG
LKVRIFPGRTLFDPSTLLNKSHEPFQVFTPFWRSCVARIEESGLPQAIPTPRHLTPPPRR
VRSQEVADLGLLPKIPWDAEFGPTWKPGEEGAHKRLRHLLGIAAQYHDLRNRPDLDGTSA
LSPHLHFGEITPRQIAQAVLDEFGVTPQEWSRLPEGPRVFLAEIGWREFAHAVLYHFPQT
DRAPLKSKFEAFPWKYAQRPLRTWQRGLTGYPIVDAGMRQLWRTGWMHNRVRMIVGSFLT
KDLLQSWQAGAEWFWDTLVDADLANNTLGWQWISGCGADASPYFRIFNPIMQGRRYDPEG
SYIRQWVPELAKLPADVIHEPWTAAPEVLSGAGVVLGETYPQPMVDHAAARVEALEALAK
TKEARD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttctctcctcctgtttcagaacgacctgcggatcgaggaccacccggccctc
cacgcggcgcgaaccgaggcggactgggtctgtccgctgttcgtctggtctcccgccgac
gagaagccctgggctcccggcgccgcgtcgcggtggtggctgcaccattccctcctggct
ctgcaggagcgtctcgccggccggggagcaccgctcgtgatccgctcgggagacgtgtcc
gagaccgttcaagcgatcgcgaaggaaaccggcgccgaatcggtctactggtccgcccgc
tacgagccccacacagcggcgctgcagagcgatctgcgaaaagatctccagaagcgcggg
ctcaaggttcggatctttcccggccggacgctcttcgatccttcgacgctcctcaacaag
agccacgagccgttccaggtctttacgccgttctggaggtcctgcgtcgcccggatcgag
gagtcggggttgccccaggcgatccccaccccgcggcacctcacgcccccgccgcggcgg
gtccgttcgcaggaggtcgccgaccttgggctgctccccaagatcccctgggatgcggag
ttcgggcccacctggaagccgggggaggagggagcccacaagcggctccggcatctcctg
gggatcgcggctcagtaccacgaccttcggaaccgacccgacctcgacggcacctctgct
ctctcgccgcatcttcatttcggcgagatcaccccgcggcagatcgcccaggctgttctc
gacgagttcggagtcacaccgcaggaatggtcccggttgccggaggggccgcgggttttc
ctggccgaaatcggttggcgcgagttcgcccacgccgtcctttatcacttcccccagacc
gaccgggctccgctgaagtccaagttcgaagcatttccctggaagtacgcccagcggccg
ctcaggacgtggcagcggggcctgaccggctacccgatcgtcgatgccggaatgcggcag
ctctggcggaccggttggatgcacaaccgcgtgcggatgattgtcggctcgttcctgacg
aaggacctgcttcagtcctggcaggcgggagcggaatggttctgggacacgctcgtcgac
gcggatctcgccaacaacacgctcggctggcagtggatttcgggttgtggagcggacgcc
tcaccctacttccgcatctttaaccccatcatgcaggggagaaggtacgatccggagggg
agctacattcgccagtgggtgccggagttggccaagctccccgcggacgtgattcacgag
ccatggacggctgcccccgaagtcctgagcggggcgggtgtcgtcctgggagaaacttac
ccccagccgatggtcgaccacgccgccgcgcgggtggaggctctcgaggctctggcgaag
acgaaggaagcccgcgactga
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