Planctomyces sp. SH-PL14: VT03_11960
Help
Entry
VT03_11960 CDS
T04354
Name
(GenBank) putative lyase
Organism
pls
Planctomyces sp. SH-PL14
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
HEAT_EZ
WD40
PQQ_2
Vitellogenin_N
DZR
Zn-ribbon_8
PQQ
DUF35_N
Motif
Other DBs
NCBI-ProteinID:
AMV18601
UniProt:
A0A142WVB4
LinkDB
All DBs
Position
complement(3042038..3046525)
Genome browser
AA seq
1495 aa
AA seq
DB search
MTGKPNLLQTVRELRKKGRQLARQVEYELARLETTGIAPSSKTLAALAEFQSEFDRLVSV
ISSPNPIHSLLSMERMLVHSSTLGLVSRVIEPILALQHVDDSAFAPLADLQCNAVKLQRE
IKTGTVAPEVLETLTEGTHAWCRLLDLVATGDALGDALWNEYFDFVESTLGSGLAIAATR
GKLRLPPRVKAFLIDGTPVGGSRDSLSAPRPEDLDPLLINRPTRQPVQETPQQQTIFDEA
QVSGVNPAPGADDLSELDALEDPDGKRFLIEDDFDESSLDREVDDLPTFIGAGLAQLESA
GDDDVDSGDSMIVPSEILTSRTSVSLPESHETAAVAGGATPEHSDEPRPCPKCGEDIFPA
MARCRGCGLVLRTEPAAAPEPSTVSGLFRTAPAYAVDSSEFELPRKETPAASGAPVSAPA
PLVASRSSGDSEFDEAGFVLPGTPAPVGNRTVGTSGGTAVLPAPTRQQIAAARTPAAEPA
APPAEPAPVASVAASAASGSSRASGTSAASGSRRSGVSSRSSGRSFQLKSGGQAAKLKTI
CDKCTADFAVSRSLEGQPVICPACGETTLAPMATTTSEVDMIAPGTDIDITLYTVREAIE
QALEQKPVVAERSWEKPLTRSQWKNLSTAIEAITPATNPMECERAKPLFEMLGNSNDERA
AELLRARYMDLPNNLKTEALKALERLRDPVAIPLVMRSLYEEKSPAVPVAIAALVSFGET
RVVPALCLLAVAAPEHRERVLQAFAGFGESIVPHMAQLSEPAEPEAVRFVAFEALGRLQS
VRAIPALSAGLKEGNKLIQRVAAEGLAYIRSKKVIRPLIEALQNPDELVRIHASAGLRDN
PDPKSAKFLVRSLRDKSLDVRKNIVASMGLCGDESVVGSLKKFLVDPSREMVVVASEAIG
RLGQNSAVPTLVKMLEEETASGEDKALIQRIFKALQVLKDRRSLVPLIGYLESTDPMIRR
RAVEALGPIQDASARRALENALRSDRADEVRAAAALALGEQGQKHAIPALEAALSGSERV
RINALQAIGLLQEKTSVPKVLTLLSDPGFRVRQAAANCLGAIKSPAAVPRLLEMVHDPDD
SVRKSVFEALAALGEKRTEQELVGEIKPTRATNPAASTTMMLDTVSLPRPSSGSKRSSLA
GLSDFAAGIFGTPWATLQELGPKKIASIASAVAVLGVAVVFFNVQGSGLPPYRRAYVEAT
SISPDGAWAATGRTSQGVEIWNTASKSVADYNPQLPNRFVTFGASPELLYCVGQNNVVKA
TLAQGRVSNATDLGTHDDNILKFCSTVNGQFFATTSGRSVRVWSTEQAKTTIEIPYGEGF
SPDDVRGKDTSLRSVSISEDGSTVMVVTSTAGARVWQNGKLSDLKLAGKNRLVAGAIRLD
GQALLLLDAKGMMTTHDMANGKLTGSIQSPSQARSGLYFLDSKRVLQTYANCVSAFDVTT
GEEKKALFDLTKFDAVDLSADQSTVVAGDNEATPLYVIEVNGGALKSELDIKVRQ
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaaagccgaatctgcttcagaccgttcgggagctccgcaagaaggggcgccag
ctggcgcggcaagtggaatacgagctcgcgcggctggagacgaccgggattgccccgtcg
tcgaagacgctggcggcgctcgccgagttccagtccgagttcgaccggctcgtctcggtc
atcagctcgccgaacccgatccattcgctcctctcgatggagcggatgctcgtgcactcc
tcgacgctcgggctggtcagccgcgtgatcgagccgatcctggcgctgcagcacgtggac
gactccgccttcgctccgctggcggacctgcaatgcaacgccgtcaagctccagcgggag
atcaagaccggaacggtcgcgccggaggtcctggagacgctgaccgaagggacgcacgcc
tggtgccggctgctcgatctcgtggccacgggggacgcgctgggggatgcgctctggaac
gagtatttcgacttcgtcgaatcgacgctcgggagcgggctggcgatcgctgccacccgg
gggaagctgcggcttcccccgcgggtgaaggccttcctgatcgacggcacgccggtcggc
ggctcccgcgattcgctctccgctccgcggccggaggacctcgatccgctgctcatcaac
cggccgacgcgacagccggtgcaggagacgccgcagcagcagacgatcttcgacgaggcc
caggtctcgggagtcaatcccgcgccgggagccgacgacctgtccgagctcgacgccctg
gaagatcccgacgggaaacgtttcctgatcgaggacgacttcgatgaatcgtcgctcgat
cgcgaggtcgacgatctcccgaccttcatcggggccggactggcacaactcgagtccgcc
ggcgacgacgacgtggactccggcgattcgatgatcgtcccgtccgagatcctgacctcc
agaacgtccgtctcgcttccggagtctcatgagacggccgccgttgcggggggggccact
cccgagcattcggacgagccccggccctgtcccaagtgcggcgaagacatcttcccggcg
atggcccgctgccgcgggtgcgggctggtcctccgcacggagccggcggccgcgcccgag
ccctcgaccgtcagcggactgttccggaccgctccggcgtacgccgtcgacagttccgag
ttcgagcttccccgcaaagaaacgcccgccgccagcggcgctccggtctccgccccggcg
cctctcgtggcctcccggtcatcaggcgactccgaattcgacgaggccggcttcgtcctt
cccggaacgccggccccggttgggaaccggacggtcgggacctcgggcggaacggcggtc
ctgccggctccgacgcggcagcagatcgcggcggcaagaactcccgcggcggagccggcg
gcgccccccgccgaaccggctcccgtggcttccgtcgcggcgtccgcggcctctggatcg
tcccgcgcctcggggacctcggcggcgagcgggtcccggcgatcgggggtctcgtcccgg
tcttcgggccgttcgttccagctcaagagcggcggccaggcggccaagctcaagacgatc
tgcgacaagtgcacggcggacttcgcggtctcccgctcgctcgaggggcagcccgtgatc
tgtcccgcctgtggcgagacgacgctggccccgatggcgacgacgacgtccgaagtggac
atgatcgccccgggaaccgacatcgacatcaccctctacacggtccgcgaggcgatcgag
caggccctcgagcagaaaccggtcgtcgcggagcggagctgggagaaaccgctcacgcgc
tcgcagtggaagaacctttcgacggcgatcgaggcgatcacccccgccacgaacccgatg
gagtgcgagcgggccaagccgctgttcgagatgctcggcaactcgaacgacgagcgggcc
gcggagctgctgcgggcccggtacatggacctgccgaacaacctcaagaccgaagccctc
aaggcgctcgaacggctgcgcgaccccgtggcgattccgctcgtgatgcggtcgctctac
gaagagaaatcgcccgccgtgccggtggcgatcgcggccctcgtgagcttcggcgagacg
cgggtcgtccccgccctgtgccttctggcggtcgcggcgccggagcatcgcgagcgggtc
ctgcaggccttcgccggattcggggagtcgatcgttccgcacatggcgcagctctcggag
cccgcggagccggaggcagtccgcttcgtcgccttcgaggcgctggggcggctgcagagc
gtccgggcgattcccgccctctcggcggggctcaaggaagggaacaagctcatccagcgg
gttgccgccgaggggctggcgtatatccgcagcaagaaagtcatccgtcccctgatcgag
gccctccagaacccggacgagctcgtccggatccacgcgtcggccggcctgcgggacaat
cccgatcccaaatcggccaagttcctggtccgttcgctgcgggacaagtcgctcgatgtg
cggaagaacatcgtggcctcgatgggcctgtgcggcgacgaatcggtcgtcggatcgctg
aagaagttcctcgtcgacccgagccgggagatggtggtcgtcgcctccgaggcgatcggg
cggctcggccagaactccgcggtgccgaccctcgtcaagatgctggaggaggagaccgcc
agcggagaggacaaggccctgatccagcggatcttcaaggcgctacaggtcctcaaggac
cgccggtccctggtgccgctgatcggctatcttgagtcgaccgacccgatgatccgccgc
cgcgccgtcgaggccctgggcccgatccaggacgcctcggcccgccgggcgctcgagaat
gccctccgcagcgaccgggccgacgaagtccgtgccgccgcagcgctcgccctgggcgag
caggggcagaagcatgcgatcccggcgctcgaggcggcgctcagcggctccgagcgggtg
cggatcaacgccctccaggcgatcgggttgctgcaggagaagacatcggttccgaaggtc
ctgacgctcctgtcggatcccggcttccgggtgcggcaggcggctgccaactgcctgggg
gcgatcaagagcccggccgcggtgccgcggctcctcgagatggtccacgatccggacgat
tcggtccgcaaatcggtctttgaggcgctggcggccctgggagagaagcggacggagcag
gaactggtcggcgagatcaagccgaccagggcgaccaaccccgccgccagcacgacgatg
atgctggacacggtttcgctcccccgtccctcctccggctcgaagcgttcatccctggcg
gggctgtccgatttcgccgccgggatctttggaactccctgggccaccctgcaggaactc
ggtcccaaaaagatcgccagcatcgccagcgccgtcgcggtccttggcgtggcggtggtg
ttcttcaacgtgcagggctccggcctgcctccttatcgccgggcctatgtggaggcgacc
tcgatcagccccgacggcgcctgggcggcgacgggccggacctcgcagggggtggagatc
tggaacaccgccagcaagtccgtggcggactacaacccgcagctccccaaccgcttcgtc
accttcggggcctcgccggagctgctctactgcgtcgggcagaacaatgtcgtgaaggcg
acgctggctcagggccgcgtttccaatgcgaccgacctcggaacgcacgacgacaacatc
ctgaagttctgctcgaccgtgaacggacagttcttcgccaccacgagcggccggtcggtc
cgtgtctggagtacggaacaggcgaagaccacgatcgagattccttacggggaaggcttc
agtccggatgacgttcgcggaaaggacacgagcctccggtcggtgtcgatcagcgaagac
ggttccacggttatggtggtcacctcgactgccggagcccgtgtgtggcagaacggaaag
ctgtcggatctcaagctggcggggaagaacaggctggtcgccggggcgatccggctggac
gggcaggcgctgctccttctcgacgcgaaggggatgatgacgacgcacgacatggcgaac
ggaaagttgaccgggtcgatccagtcgccgagccaggcgcggagcgggctgtacttcctc
gattccaagcgggtcctgcagacatacgcgaactgcgtcagcgcgtttgacgtcacgacg
ggcgaggagaagaaggcgctgttcgacctgacgaagttcgacgcggtggacctgtcggcc
gaccagtcgacggtggtcgcgggagacaacgaggcgacgccgctttacgtgattgaggtg
aatgggggagcgttgaagtcggagctcgacatcaaggtccggcagtag
DBGET
integrated database retrieval system
