Planctomyces sp. SH-PL14: VT03_19840
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Entry
VT03_19840 CDS
T04354
Symbol
bepF_3
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K02005
HlyD family secretion protein
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VT03_19840 (bepF_3)
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Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AMV20158
UniProt:
A0A142WZB6
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Position
complement(5127340..5128728)
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AA seq
462 aa
AA seq
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MTFSQPVSPPRTATRLLALALAFAAPTLSGCQRTAAPTESTAAAGELPPIRVVPIRPARK
TLRRIVELPGRVEAYEVAPLHAKVTGYVESIPVDIGDSVAGPKGDGPTATPGAELCRLLV
PELREELAQKAALVGQAVAEVAQAEAAVKVAEAGLQSAHARVQEAEATVAREEATYKRWV
SEFERITQLVESGAVTRKVLEETKAQLDAAAAGRQEVTARIASVQALAREAVAGLEKARA
DLTATLSRQKVAEAEQRRLEAMVGYSVVRAPFDGVIVERNVHTGHLVRTGGGSGAGDRPL
LTIMKIDPVRVFVDVPEGDAVYVDAGTKATIKVPSLAGDPLAAPVTRTSWSLNATSRTLT
AEIDVANASKRLRPGLYVQVALTVAELEDVLSLPRTAIFTQDKRTCCYTIGADGKVVLTP
VTLGLQAGNELEVRSGLTGDEQVIGANTSAFRPGLPVEIGKP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgttctcgcaacctgtttctccgcctcgaacggccacccgtctgctggccctcgcc
ctcgcctttgcggctccgacactctccggatgtcaaaggaccgcggcgcccacggaatcc
acggcggcggccggggagcttccccccattcgcgtggtgccgatccgccccgcgcggaag
acgctgcggcggatcgtcgagctccccggacgcgtcgaggcgtacgaggtcgctcccctc
cacgcgaaagtgaccggatacgtcgagtcgatcccggtcgacatcggcgattccgtcgcc
gggccgaaaggagacggaccgaccgcgacgcccggggcggagctgtgccggctgctcgtg
ccggagcttcgcgaagagctcgcccagaaggcggctctcgtcggccaggcggtggcggaa
gtcgcgcaagctgaggcggcggtcaaggtggccgaggcgggcctgcagtccgcccacgcc
cgtgtgcaggaggcggaagcaaccgtggcccgcgaggaggcgacctacaagcgatgggtg
tcagagtttgagcggatcacgcagctcgtcgagagcggggcggtcacccgcaaggtcctg
gaagagaccaaggcgcagctggatgcggcggccgcggggcggcaggaagtgaccgcccgc
atcgcctccgtgcaggcgctcgcccgcgaggcggtggcggggctcgagaaggcccgggcg
gacctgacggcgaccctttcccggcagaaggtggccgaggcggaacagcggcggctggag
gcgatggtcgggtactcggtggtccgggccccgttcgacggcgtgatcgtcgagcggaac
gttcacaccggccacctcgtgcgaacagggggcggaagcggcgcgggggaccggccgctg
ctgacgatcatgaagatcgatccggtgcgggtgttcgtcgacgttccggagggggacgcg
gtgtacgtcgacgccgggacgaaggcgacgatcaaggtcccctcgctggcgggcgatccg
ctggcggccccggtcacccggacgagctggtccctcaacgccacctcccggacgctgact
gccgagatcgacgtggcaaacgcgtcgaagcggctgcggcccgggctgtacgtgcaggtc
gcgctgaccgtggcggagctcgaagacgttctcagtctcccccggacggcgatcttcacg
caggacaagcggacctgctgctacacgatcggagcggacgggaaggtcgttctcacgccg
gttactctagggctgcaggcggggaacgagctggaggtccgaagcggcctgacgggggat
gagcaggtgatcggcgcgaacacgtccgcgttccggccggggctgccggtggagattggc
aagccgtag
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