Pelodictyon luteolum: Plut_0948
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Entry
Plut_0948 CDS
T00291
Name
(GenBank) Primosomal protein n
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
plt
Pelodictyon luteolum
Pathway
plt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Plut_0948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plt03400
]
Plut_0948
Enzymes [BR:
plt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plut_0948
DNA repair and recombination proteins [BR:
plt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plut_0948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA_3primeBD
AAA_16
SLFN-g3_helicase
zinc-ribbons_6
HTH_24
TrwB_AAD_bind
AAA_19
Zot
Zn_Tnp_IS1595
ATPase
Viral_helicase1
AAA_22
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
ABB23810
UniProt:
Q3B4C1
LinkDB
All DBs
Position
complement(1072352..1074784)
Genome browser
AA seq
810 aa
AA seq
DB search
MYALAIAEKLFRGEPFPLMVPGPPEEGLLPGSMVLVVPRGGKAAPSTAYIIETGIEPPLK
EPPAELADILHGGEPVLTPPLIILTRWMAGYYLTRHIDCVTAAVPVAVRTRVDDIVEAAG
FSLETDTRRVRSTALRRSIMQLLAKETRITVKQLQRRLGKKHIYGTLSELERSGHLKLRR
KFTSTAQRTVPAWRRAPVLPGEAEEELKNTPKQLETFRRVSAFGPGGASLEATAASRRIL
NTLTASGYLEKIAVAVEGRFDTGMPTEQEEPKQPTAQQEAVLGELRSASRKGGYKTFLLH
GVTGSGKTLVYIEFLKEVLKEGRTAIVLVPEIALTPQTAGRFRQHFGDTVAIMHSAMSNQ
EKYDAWHRLRSGRATIALGARSTIFAPLSNLGAVIVDEEHDGAYKQDRNPRYSARDLAVM
RARTEGAVCILGSATPSFESYENALQEKYRLLELRDRIDGATMPKLCLIVMKDSPKATPS
ISEKLRHEISRRMERDEQVILLQNRRGFSGSVLCFACGHVPLCPHCGIPLVYHAGHRQLR
CHYCGHTEPFSKVCPACASPDLFYKGSGTERIEEELQSLFPEERILRMDVDTTTTKGSHG
RILDEFRRGKARILLGTQMVAKGLDFPRVTLVGVLMADIGLNLPDFRASERTYSLLTQVA
GRAGRSSSPGEVYLQVYNPESEVFNALLRGSYSAFFKHETDSRRELCYPPHARLVKFECS
SPDEETAEEAAMTCRTMLLEAVAEGQGVVLGPAPAGIARIRGSYRYHVLLKLTGGRLTEA
FALGLQDEIARRFRTPSAILSIDVDPGSLM
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcactggccatagcagaaaaactcttcaggggcgaaccctttccgctgatggtc
ccgggccctcctgaagagggcctcctgccgggcagcatggtgctggttgtaccaagaggc
ggcaaagccgccccctccacagcctatatcatcgaaaccggcatcgagccgcctttgaag
gagcctccggctgagctcgccgacatcctacacggcggagagcctgtcctgacgcccccg
ctgatcatcctcacccggtggatggccggatactaccttacccgccacatcgactgcgtc
accgccgcagtaccggttgccgtgcgtacgagggtcgacgacatcgtcgaagcggccggc
ttcagcctcgaaaccgacacccgccgggtccgcagcacggcgctccgccgcagcatcatg
cagctgctcgccaaagaaacacgcattacggtcaagcagctccagcgacggctcggcaaa
aaacacatctacggcaccctttccgaactcgaacggagcgggcacttgaagctccgccgg
aagttcaccagcacggcccaaaggacggtcccggcatggcgccgggccccggttctgccg
ggtgaagctgaagaggagctgaaaaacaccccgaaacagctcgaaacgttccgccgcgtc
tcagccttcggtcccggcggagcgtcgctggaagccaccgccgcatcccgcaggatcctc
aacaccctcacggcctccggttacctggaaaaaatagcggttgccgtggagggccggttc
gataccggcatgccgacagagcaggaagaaccaaaacagccgaccgcgcagcaggaggct
gtcctcggggagctcaggagcgccagccggaagggcgggtacaaaacattcctcctgcac
ggcgtcaccggcagcggcaagaccctcgtctacatcgaattcctcaaagaggtgctcaag
gaaggcaggaccgccatcgtcctcgtccctgaaatcgccctcaccccccagaccgcaggc
cggttccggcagcatttcggagacacggtcgccatcatgcacagcgccatgagcaatcag
gagaaatacgacgcatggcaccgcctccggagcggaagggcaacgatcgccctcggcgcc
cgttccaccatcttcgccccgctctcgaacctcggtgccgtgattgtcgatgaagaacac
gacggtgcctacaaacaggaccggaacccccgctacagcgcccgtgacctcgccgtcatg
cgcgcccgcaccgaaggggccgtatgcatcctcggctccgccaccccatccttcgaatcc
tacgagaatgcccttcaggaaaagtaccgcctcctcgagctccgggatcgcatagacggc
gccaccatgccgaagctctgcctcatcgtgatgaaggacagcccgaaggcgaccccctcc
atatccgaaaagctccgccacgaaatctccagacgcatggaacgagacgagcaggtcatc
cttctgcagaaccggagggggttttccggcagcgtactctgtttcgcctgcggccatgtc
cccctatgcccccactgcggcattccgcttgtctaccacgccggccaccgccagctgcgc
tgccactactgcggccataccgagcccttcagcaaggtctgtcccgcatgcgcttcccct
gacctcttctacaagggaagcgggacggaacgcattgaagaggagctccagtcgctcttt
cccgaggagcggattctgcgcatggacgtggacaccacaacaacaaaaggctcgcacggg
cgcatcctcgacgagttccgccgtggaaaggcccgcatccttctcggcacccagatggtc
gccaaggggcttgatttcccccgcgtcactctcgtcggcgtccttatggccgacatcggc
ctcaacctccccgacttccgcgcctcggagcgcacctactccctcctcacccaggtcgcc
ggccgcgcaggccgctcgtcaagcccgggagaggtctatctgcaggtatacaatccggaa
agcgaagtcttcaacgccctgctccgcggcagttacagtgcattcttcaagcatgagacg
gactcccgaagggaactctgctatccgccccacgcaaggctggtgaagttcgaatgcagc
tctccggatgaagagaccgcagaagaggcggccatgacatgcaggacgatgctgcttgaa
gccgtggccgaaggccagggagtggtgctcgggcccgcaccggcaggcatcgccagaatc
cgcggcagctaccgctatcatgtgctgttgaaactcaccggaggtcgcctcacagaggcc
ttcgccctcggccttcaggacgagatcgcccggcggttccgcactccttctgccatcctc
tccatcgacgtcgatcccggcagcctgatgtga
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