Photorhabdus laumondii subsp. laumondii TTO1: plu3550
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Entry
plu3550 CDS
T00149
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu03410
Base excision repair
plu03430
Mismatch repair
plu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
plu3550 (recJ)
03430 Mismatch repair
plu3550 (recJ)
03440 Homologous recombination
plu3550 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu3550 (recJ)
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
plu3550 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
plu3550 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
plu3550 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAE15923
Pasteur:
plu3550
UniProt:
Q7N1C6
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Position
complement(4184298..4186031)
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AA seq
577 aa
AA seq
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MNIETQLRRRLAVNDSHLPQQIHPLLRRLYAIRGIQQANELERGVQGLLNYQHLSGVEQA
VALLLTALHEHWRIVIVGDFDADGATSTALAIRSLRSMGYRHLDYLVPNRFDNGYGLSSQ
VVEEVVKKGADLIITVDNGISSHEGVAAAHQHRMKVIVTDHHLPGDVLPAADAIINPNLA
DCSFPSKSLAGVGVTFYLMSALRAALRKDQWFEKQGIALPNLAEMLDLVALGTVADVVPL
DTNNRILVYQGLNRIRAGRCCAGIRALLEVSSRDAYKLTASDLGFFLGPRLNAAGRLDDM
SIGVTLLLTDDIAKARQIACELDSLNQTRREIEQGMQQEALQICDKLERTSTELPYGLAL
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSVQGLHMRDALERLDTLHP
GLILKFGGHAMAAGLSLEQDKFEQFQYHFSTLMADWLDISQLEGVIWSDGELAINELSLD
IAEMLRDGGPWGQAFPEPIFDGKFKLLQQRIVGERHLKVIVEPLNGGPMLDGIAFNIDPT
RWPDNSVREVELAYKLDVNEFRGNRNVQLLIQHLWPY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattgaaacacaacttcgccgccgcttggcggtgaatgacagtcaccttccacaa
cagattcatccactactgcgtcgcttatatgccattcgtggtatccagcaagctaatgaa
ttggagcgtggtgttcaaggattattgaattatcagcatctaagtggtgtggaacaggcg
gtggcactcttgttgactgcacttcatgaacactggcgtatcgttattgtcggtgatttt
gatgctgatggggccaccagcacggcattggcgatccgatcattacgctcgatgggatat
cgccatctggattatctggtaccaaatcgttttgacaatggttatggtttaagctcacag
gtggtagaagaggtcgttaaaaaaggcgctgacctgattattaccgtggataatggtatc
tcttcccatgaaggggttgcggctgcccatcagcaccgtatgaaagtgattgtcacggat
catcacttgccgggtgacgttttgccggcggctgatgccattattaatcctaatcttgcc
gattgttcgttcccgtcgaaatcattggccggggtgggtgtcacattttatctgatgtct
gccttaagggcggcactgagaaaagatcaatggtttgaaaagcaaggaatagcgctgccg
aatctggccgaaatgttggatttggttgcgttaggaactgttgccgatgttgtaccttta
gataccaataaccggattctggtttatcagggcttgaaccgaattcgtgcaggacgctgt
tgtgcggggatacgtgcattattggaagtttccagccgtgatgcttataagctgacagcc
agcgatttggggttttttctgggaccaagactgaatgccgctggtcgccttgatgatatg
tccattggcgtcacgttattgctcactgacgacatagcaaaggcgcgtcagatagcttgt
gaattggacagtcttaaccagactcggcgtgaaatagagcagggaatgcagcaggaagca
ctgcaaatctgtgacaaacttgaacgtaccagcactgaactgccttatgggctagcgctc
tatcatccagaatggcatcaaggggtagtcggaattttggcttcccggattaaagagcgt
tttcatcggcctgttatcgcatttgcaccggccggtgacggtattttgaaaggttctggt
cgttcagtgcagggattgcatatgcgggatgcgcttgagcggcttgatactttgcatccg
ggtttgatacttaaatttggtggtcatgcaatggcggccggtttgtcacttgaacaggat
aaattcgaacaatttcagtatcacttttctacgctaatggcggattggttagatatttcg
caacttgaaggtgttatctggagtgatggtgaattagcaattaatgaactgtcattggac
attgcagaaatgttgcgtgatggcggtccttggggtcaggcattcccggaaccaattttt
gacggtaaattcaaactactgcaacagcgcattgttggagagcgccatttaaaagtgata
gtagagccattaaacggtgggccgatgctggatggtattgcgttcaatatcgatcctacc
cgctggcccgataacagtgtccgcgaagtagaacttgcctataaactggatgttaatgaa
tttcgtggcaaccgtaatgtacagcttttgatccaacatctctggccctattaa
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