Pseudomonas luteola: FOB45_20030
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Entry
FOB45_20030 CDS
T06601
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plul
Pseudomonas luteola
Pathway
plul03030
DNA replication
plul03430
Mismatch repair
plul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOB45_20030 (dnaE)
03430 Mismatch repair
FOB45_20030 (dnaE)
03440 Homologous recombination
FOB45_20030 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plul03032
]
FOB45_20030 (dnaE)
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_20030 (dnaE)
Enzymes [BR:
plul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOB45_20030 (dnaE)
DNA replication proteins [BR:
plul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOB45_20030 (dnaE)
DNA repair and recombination proteins [BR:
plul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOB45_20030 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QEU29923
UniProt:
A0A5P2SIG5
LinkDB
All DBs
Position
1:complement(2732434..2735952)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTVSFVHLRLHTEYSLVDGLVRVKPLVKSVAGAGMPAVAVTDQNNLCSLVKFYKAAMGAG
IKPICGSDLWLANPDEEGPLTRLTLLVMNKQGYRNLTELVSRGYQEGQHEGQIIVQREWV
KAAADGLIALSGSKEGEVGLALLAGDNVRAERLLGEWLDVFSDRFYLEVQRTQRVNDEEH
LHAAVALADRCNVPLVATNDVRFIKQDDFEAHETRVCIGEGRVLDDPLRPRTYSDQQYLK
SPEEMWELFSDLPEALENTVEIAKRCNIEVQLGKYFLPNFPIPEGMTIDDYLRKVSFDGL
EERLAVLLPKETPDYEAKRQVYVDRLNFELNIIIQMGFPGYFLIVMDFIQWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYVA
GAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLQKAYEQEE
MLRDFLKVDEEAQEIWDMALKLEGITRGTGKHAGGVVIAPTKLTDFSPVSCDEDGNGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWAMETINREHAAKGLDPVNIDFIPLDDKKTYDL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
ELAYPHPDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMGGYTLGQADMLRRAMGKKKPEE
MAKQRGGFIEGCANNGIDAELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHFP
APFMAAVLSADMHNTDKVVILIEECRHMKLRIDAPDVNISDFKFTVNEGGRIVYGLGAIK
GVGEGPVEAIVEARQEGPFKDLFDFCDRVDLKRINKRTLEALIRSGALDRLGPHYHDELK
AYQATIDQNRSVLLAAMEEAIAAAEQTARSNNSGHMDLFGGVFAEPEADVYVNHYKARAL
TLKERLRGEKETLGLYLTGHPIDEYEGEVRRLARQRIVDLKPSRETQTVAGLIVNLRVMK
NKRGDKMGFVTLDDRSGRIEASLFAEAFHAAQSLLQTDALVIVEGEVSQDDFSGGLRLRA
KRVLGLEEARTALAESLRISVASDALKGDRLRWLADLCTKHRGACPVTLDYRSQDARALL
QFGEQWRIDPGDGLIQALRDQFGRENVFLNYR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatcctttgttcacttgcgtttgcatactgaatattcgctggttgatggtctg
gtcagggtaaagcccttggtcaagtcggtagcgggggcaggcatgcctgctgtagctgtg
acagaccagaataatttgtgctcgctggtaaagttttacaaggctgctatgggtgccggt
atcaagcccatctgtggctccgacctgtggctggccaatcctgatgaggaggggccgctt
acccgcctgaccttgctggtcatgaataaacaaggctatagaaacctgactgagctggtt
tcgcgcggttatcaggaaggacagcacgaaggccagatcattgtccaacgtgagtgggtc
aaggcggctgccgacggcttgattgcgctttccggctctaaagagggtgaggtggggctg
gccttgctggccggtgataacgtacgcgccgagcggttgttaggtgaatggctggacgtc
tttagtgatcgtttttacctggaggtgcagcgtacccagcgcgtcaatgatgaagaacat
cttcacgccgcggttgccttggcggatcgttgcaacgtaccgcttgtagcaaccaacgat
gttcgttttatcaagcaggacgatttcgaggcccatgaaacgagggtctgcattggcgag
gggcgggtactcgatgatccgttgcgtcctcgtacctatagcgatcaacagtacctcaag
tctcctgaggagatgtgggagctttttagtgatctgccagaggccttagaaaatacggtc
gaaatcgccaagcgctgcaacattgaagtgcagcttggcaaatatttcttgcctaatttc
cccattcccgaaggcatgaccattgacgattacctgcgaaaggtatcgtttgacggattg
gaagagcgcctagcggtactcctgcctaaggaaacgccggattacgaggccaagcggcaa
gtctatgtggatcgcttgaacttcgagctgaatatcatcattcagatggggtttcctggc
tacttcctcatcgtaatggacttcattcagtgggcgaagaacaatggcgtcccggtgggg
ccgggtcgtgggtcgggtgctggctcgctggtagcgtatgtgctgaaaattacggatctg
gatccactagcctatgatctgctgttcgagcgcttccttaaccctgaacgtatttccatg
cctgacttcgatgtcgatttctgcatggacggtcgtgaccgcgtaattgattatgttgca
ggcgcctatgggcgtaacgcggtcagtcagatcatcacctttggcaccatggccgcaaag
gcggtggttcgtgacgttgcccgtgtgcagggtaagtcttacggtctggccgacagattg
tccaagatgatccccttcgaagtaggcatgacgcttcagaaagcctatgagcaggaggag
atgcttcgtgacttcctcaaggtcgacgaagaggcccaggaaatctgggacatggcgctc
aaactggagggtatcactcggggaaccggtaagcatgcgggtggtgtggtaatcgcacct
accaaactgacagacttctctcccgtttcttgcgatgaggacggtaacggactggttacc
cagttcgataaggacgatgtagagcaggcgggcctggtgaagttcgacttcctgggtttg
cgaacattgaccatcattaaatgggcaatggaaacgatcaatcgagagcatgctgcaaaa
gggctcgatccggttaacatcgactttatcccgctggatgacaagaaaacctacgatctc
ttgcagaaggcggagacgacggccgtgttccagctggaatcccgcggcatgaaagagctg
atcaaaaagctcaagcccgactgcctggaagacctgattgcattggtggccttgttccgt
ccggggccgctgcagtcaggcatggtagatgacttcatcaaccgaaagcacggccgtgcc
gagctggcctatccccaccccgattatcagtatgaagggctcaagcctgtcctggctccc
acctatggcatcatcctgtatcaagagcaggttatgcagattgcccaggtcatggggggc
tataccctgggtcaggccgacatgctgcgtcgcgccatgggtaagaaaaagccggaggaa
atggccaagcagcggggcggctttattgaaggttgtgccaataatggcatcgatgctgag
cttgccggtaacatctttgatctggtagaaaaatttgcgggttatggcttcaacaagtcc
cactcggctgcctatggtctggtgtcctatcaaactgcctggctgaaggcgcatttccct
gcgccgttcatggctgcggtgttgtcagcggatatgcacaacaccgataaggtggtaatc
ctcattgaggaatgccgccatatgaaactgcggatcgatgcgccggatgtgaacatctct
gacttcaagttcactgtaaatgaaggtggacgcatcgtttacggtcttggtgctatcaag
ggggttggtgagggtccggtagaggcgattgtagaagcgcgccaggaggggcctttcaag
gatctgttcgatttctgcgaccgtgtcgatctcaagcgcatcaacaaacgtacccttgaa
gcgcttattcgctcgggagcgctggatcgcctggggccgcattatcatgacgagctcaag
gcctaccaggcgactatcgatcagaatcgctcagtgctgttggccgcaatggaagaggcg
attgcggcagccgagcaaacggcacggagcaataacagcgggcatatggatttattcggg
ggtgtgtttgccgagccggaagccgatgtctacgttaatcattacaaggcacgagcgctg
acgctcaaggagcgtctacggggggaaaaggaaaccctcggcctgtacctgacggggcat
ccgatcgatgagtatgagggtgaagtacggcgactggctcgccagcgcattgtggacctc
aagccctctcgtgaaacccagacggttgccggccttatcgttaatctgcgtgtgatgaaa
aacaagcgcggcgataagatggggtttgttacactggatgatcgctcgggccggattgag
gcttcgctgtttgccgaagcatttcatgctgctcagtccttgttgcagactgacgccttg
gtcattgttgagggcgaagtcagccaggatgatttctcgggcggcttgagactgcgcgcc
aagcgcgtgctgggcctggaagaggctcgcaccgcattggctgaaagtctgcgcatctcg
gttgcaagcgatgcattgaaaggcgaccgtcttcggtggttggccgacctctgtaccaag
catcggggcgcttgcccggttacgctggattatcgaagccaggatgccagggccctgctg
caatttggcgagcagtggagaatcgatcctggtgatggcctgatacaggcactacgtgac
cagtttggaagagaaaacgtcttcctgaactaccgttga
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