KEGG   Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_18135Help
Entry
A4R40_18135       CDS       T05478                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
plum  Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum00473  D-Alanine metabolism
plum00550  Peptidoglycan biosynthesis
plum01100  Metabolic pathways
plum01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:plum00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    A4R40_18135 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A4R40_18135 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    A4R40_18135 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:plum01011]
    A4R40_18135 (ddl)
Enzymes [BR:plum01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     A4R40_18135 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:plum01011]
 Precursor biosynthesis
  Amino acid ligase
   A4R40_18135 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATPgrasp_ST ATP-grasp_3 ATPgrasp_Ter ATP-grasp RimK TTL ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: AWK43277
LinkDB All DBs
Position
complement(4299896..4300816)
Genome map
AA seq 306 aa AA seqDB search
MAEKVAVLLGGTSAEREVSLLSGQAVLAGLREAGIDAHPVDTKDFPVTQLKEAGFEKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALSMDKLRTKQVWQGIGLTVSPYVSINSQ
QVERLTDSQLQEYVADLGLPLIVKPSLEGSSVGMTKVNEISELRGALEAAFRYDVDLLVE
KWLHGPEYTVAILGDTALPSIRIQPAAVFYDYDAKYWSEETQYFCPSGLSDEKEQQLAEL
ALKAYQSVGCSGWGRVDVMMDTDGDFYLLEVNTSPGMTSHSLVPMAARQAGLSFSQLVVK
ILELAD
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atggctgagaaagtcgcggtactgttgggaggaacttccgctgagcgtgaagtttcgctg
ttatcgggacaagccgtgttggctggattgagagaagcgggtattgatgcacatccagtt
gatacaaaagattttcctgtgactcaacttaaagaggccggatttgagaaagtctttatc
gcgcttcatgggcgtggtggggaagacggtactttgcaaggggtattggaatttttgcag
ttaccctataccggtagtggcgtgatggcttctgcactgtcaatggataaattgcgtaca
aaacaggtatggcagggaattgggttgactgtttcgccgtatgtttcaattaattctcag
caagttgaacgattgactgattctcaactccaagaatatgtagcagatttaggtttgcca
ttaattgttaagccaagtctggaaggttccagtgttggtatgactaaggttaatgagatt
tcggagttgcgtggtgcattagaggctgcgtttcgttatgacgttgacttgctggtcgaa
aaatggttgcacggcccggaatacacagtagccatccttggtgatacggctttaccttct
attcgtattcaacccgctgctgttttttatgactatgatgcaaaatattggtctgaagaa
acacaatatttttgtccaagtggcttaagtgatgaaaaagagcagcaattggcagaactg
gcgcttaaagcttatcagtcagttggatgcagtggttgggggcgagttgatgtcatgatg
gatactgatggtgatttctatctgttggaagtgaatacctctccggggatgaccagccac
agcttggtgccgatggctgcgcgtcaggctggattaagtttttcacagttggtggtaaag
attttggagttggctgattga

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