Planococcus sp. MB-3u-03: CW734_02285
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Entry
CW734_02285 CDS
T05387
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx02020
Two-component system
plx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CW734_02285
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CW734_02285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plx03021
]
CW734_02285
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plx02035
]
CW734_02285
Transcription machinery [BR:
plx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CW734_02285
Bacterial motility proteins [BR:
plx02035
]
Flagellar system
Flagellar assembly proteins
Stator
CW734_02285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
Rv2175c_wHTH
HTH_28
CT_C_D
HTH_23
HTH_IclR
HTH_24
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AUD12691
LinkDB
All DBs
Position
202847..203560
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AA seq
237 aa
AA seq
DB search
MPIAQRRRDAGDYLVAKYLPLVDYVIQRFLISLPKTVDKDEVRSYAYEGLLDALDKFKPE
KDWKFETYAAWRIKGAIIDGLRKSDWLPRSLRDKVKKIEKAYAELEQQKGESASDQEVSE
YLGMTPAELNRAVSEAALSAMLSMDDDQSNLEERMPRATIGSPERELSGQMTKEALAKAI
ATLPEKEKLTVSLCYFEEMKLTEIAEILGLSVSRVSQLHSKAMLRLHAAMLSVHEHY
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagcgcagagacgacgggatgccggcgattatttagtcgcgaagtatttgccc
ttggtggattatgtgattcaacgctttcttatcagcctgccgaaaaccgtcgacaaagac
gaagtccgaagctacgcctatgaaggcttgctggacgcactcgataaattcaagccggag
aaagactggaagttcgaaacctatgccgcttggcggatcaaaggcgcaatcatcgatggc
ctccggaaaagcgactggctgccgcgttccttgcgggacaaagtgaaaaaaatcgaaaaa
gcatacgccgaactggaacaacagaaaggcgaaagtgccagtgaccaagaagtgagcgag
tacttggggatgaccccggcagaattgaaccgcgccgtctcagaagctgccttatcggca
atgctgtcgatggatgatgaccagtcgaatttggaagagcgcatgccgcgcgccactatc
ggttcgccggaacgcgagctgtctggacagatgaccaaagaggcgttggccaaagccatt
gccacattgccggaaaaagagaaattgacggtttctttatgttattttgaagaaatgaag
ctgactgaaatcgcagagattctcgggctcagcgtttccagagtgtcgcaattgcattca
aaagcgatgctccggttgcacgcagcgatgctatcggtccatgaacattattaa
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