Paenibacillus lycopersici: GXP70_10235
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Entry
GXP70_10235 CDS
T07013
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_10235 (addB)
Enzymes [BR:
plyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP70_10235 (addB)
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GXP70_10235 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QHT63850
UniProt:
A0A6C0G7X4
LinkDB
All DBs
Position
2362733..2366374
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AA seq
1213 aa
AA seq
DB search
MALRFVIGRSGSGKTHCVLDEIRGRILAEPDGPPIIILVPEQATFQTEYALLHHPELSGS
IRAQALSFRRLSFRIMQETGGTALTPISENGKNMLLYKIVSRLNGELQLFQGSESQHGFI
ERLGELMTEWKRYGIDAEALQGFGEHHLSAARSTLLGRKLDDLQLISSRLEQELAGLYVD
AEDYLGWLIRGVHEAPSMQDCEIWVDGFHGFTPTELEALGALMKHARHMTVTLCLDKPYG
SGEMPHELDLFRPTAETYMKLRELAVNNGIEIGEPLLLEGTPYRFKDSPMLAHVERHYGR
GGRKELRLTAAELADGAVSLHAASGRRAEVEAVARDIVKRVRDEGLRYRDMAVMVRNAPD
YNDYIKAVLADYGIPFFLDQKHAALHHPLVEFIRSALEIAVYGWRFEAVFRCIKTELLIP
EDGTLTRETFDLLENYALATGMNGNKWLSASQWRPLARDTLDGEPAQAGDREMREFEAVM
AAREAVVPVLKKFIGELKKAPDVRAMCEAVYRLLMNVDAPDRLERWSRKAAAEGNALRAR
EHRQLWDGVMDLLDQLTEMTGTETMTVELFAGMAETGLESLKLAAVPPALDQVLIGSMDR
TRSGNIGICYLLGANDGVMPQRMKEDGVLTEQERETMENGGLVMAPGVRRKLLDERFMIY
NALTTPSRHLWISWPLADEEGKSLLPSEVIRHVKGMFPGLTEASVAVEPVPGMPEGEQLS
FMAHPERTLSYLITQLRTWRHGAAIASFWWETYNWYAVRPAWQNKLQRLAGSLRYTNEEP
ALSRETADLLYGKLLRGSVSRMERFVSCPFQHFAIHGLRLRERMQYRLAAPDIGQLFHAA
LSRLTETLGDRMGALTAAELRAHCAAIVSELAQRLQSQILLSSSRHQYVARKLTDIISQA
ATILSEHARRAAFKPVGLEIGFGPEGPLPPVAIPLSDGKMLEMVGRIDRVDAAQTTEGLL
LRVIDYKSSAKQLRLEEIAYGMALQMLTYLDVLLTHAPEWLGQPAKAAGALYFHVHNPVI
TSSNGMPPAQARMEMLKRFKLKGLVLADEETVRLMDNALSTGYSDLLPLALKKDGSFYSN
SSVVSDEQWGKLRKSVRGTLRRIGDRIAGGDVSIAPYRLGGKTPCQFCDYKPVCQFDPLI
EGNDYNKLQKTGKDEVWTLFAAGEEDEDAADGNGASDRQGQAGLQEQQERQEQQEQQEQQ
EQQEQQGKEASEQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctccgctttgtaatcggacgatcggggtccggcaagacgcactgcgtgctggac
gagattcgcgggcgtattctggcagagcccgacggaccgcccattattatactggtgcct
gaacaggcgacctttcaaaccgagtacgcgctgctccatcatccggagctgagcggctcc
atccgggcgcaggcgctcagcttccggcggctgtccttccgcatcatgcaggaaacgggc
ggcacggcgctgacgccgatcagcgagaacggcaagaacatgctgctctacaagatcgtc
tcccggctgaacggcgagcttcagctgttccagggcagcgagagccagcacggattcatc
gaacggctcggcgagctgatgaccgagtggaaaagatacggcatcgacgccgaggcgctg
caagggttcggcgagcatcatctgtccgccgcgcgcagcacgctgctcggccgcaagctg
gacgatctgcagctgatatcgagccggctggagcaggagctcgcgggcctctacgtcgat
gcggaagattacctcggctggttgatccggggagtccatgaagcgccttcgatgcaggat
tgcgagatttgggtcgacggcttccacggcttcacgccgacggagctcgaagcgctggga
gcgctcatgaagcatgcccggcacatgaccgtgaccctatgtctggacaagccgtacggc
agcggagaaatgccgcacgagctcgatttgttccggccgacggcggagacgtacatgaag
ctgcgcgagctcgccgtgaacaacggcatcgagatcggggagccgctgctgctggaaggc
acgccttaccggttcaaggacagcccgatgctggcgcatgtggaacgccattacggccgc
ggcggcaggaaggagctgcggctgacggccgcggagcttgcggacggggcggtatcgctt
catgcggcttcagggcgcagggcggaagtggaagccgtggcgcgcgacatcgtcaagcgg
gtgcgcgacgaagggctccgttaccgcgacatggccgtaatggtgcggaacgcgccggac
tacaacgactatatcaaggcggtactcgccgattacggcattccgttcttcctcgaccag
aagcatgcggccttgcaccatccgctcgtcgaattcatccgctcggccttggagatcgcc
gtgtacggctggcggttcgaggcggttttccgctgcatcaagaccgagctgctcattccg
gaggacggcaccctgaccagggaaacgttcgatttgctggagaattacgcgctggcgaca
gggatgaacgggaacaaatggctctcggccagccagtggcggccgctggcgcgcgatacg
ctggacggcgagcccgcgcaggcgggggatcgcgagatgcgcgaattcgaggcggttatg
gccgccagggaagccgtcgtgcccgtgctgaagaaattcatcggcgagctgaagaaggcg
ccggacgttcgcgccatgtgcgaggccgtgtacaggctgttgatgaacgtcgacgcgccc
gaccgtttggagcggtggagccgcaaggcggcggccgaaggcaacgcgctgcgcgcgcgc
gagcaccggcagctgtgggacggcgtcatggacctgctggaccagctgacggagatgacc
ggcacggaaacgatgacggtcgagctgttcgccggcatggcggagacgggacttgagagc
ttgaagctcgcggcggtgccgccggcgctcgatcaggtgctgatcggcagcatggacagg
acgcgttccggcaacatcgggatttgttacttgctgggcgcgaacgacggcgtcatgccg
cagcggatgaaggaagacggcgtgctgacggagcaggagcgggaaacgatggagaacggc
ggtctcgtcatggcgccgggcgtccgcaggaagctgctcgacgaacggttcatgatctac
aacgccctgacgacgccgagccggcatctgtggatcagctggccgctggcggacgaagaa
ggcaagagcctgctgccgtccgaggtgatccggcatgtgaaaggaatgttcccgggattg
acggaggcaagcgtcgccgtcgaaccggtgcccggcatgccggaaggcgagcagctgtcg
ttcatggcgcatcccgaacggacgctgtcgtacttgatcacgcagctgcggacttggcgg
cacggcgccgctatcgcctcgttctggtgggagacgtacaactggtatgcggtcaggccg
gcgtggcagaacaagctgcagcggctggcgggctcgctgcgctatacgaacgaagaaccg
gcgctctcccgcgagacggcggacctgctgtacggcaagctgctgcgcggcagcgtgtcg
cggatggaacggttcgtgtcgtgtccgttccagcatttcgccattcacgggctgcggctc
cgcgagcggatgcagtacaggctggccgcgccggatatcgggcagctgttccatgccgcg
ctgagccggctgacggagacgctcggcgaccggatgggcgcgttgacggcggcggagctg
cgagcgcattgcgcggcaatcgtgagcgagcttgcgcagcgcctgcaatcgcaaatcctg
ttaagcagcagccgccatcaatacgtggcgcgcaagctgaccgacattatcagccaggct
gcgacgatcttgagcgagcatgcgcgccgcgccgcgttcaagccggtcggcctcgaaatc
ggcttcggtcccgaaggtccgctgccgccggtcgccataccgctgtccgacggcaaaatg
ctggaaatggtcggacggatcgaccgcgtggacgccgcgcagacgacggaaggcttgctg
ctgcgggtcatcgattacaagtcgagcgccaagcagctgcggctggaggaaatcgcgtac
ggcatggcgctgcaaatgctgacgtacctggacgtgctgctgacgcatgcgccggaatgg
ctgggccagccggcgaaggcggcgggcgcgctgtatttccatgtgcacaatccggtgatt
acgtcctcgaacggcatgccgcccgcgcaagcgaggatggaaatgctcaagcggtttaaa
ttgaaggggctcgtcctcgccgacgaagagacggtccgcttgatggacaatgctttgtcg
acggggtactccgatctgctgccgctcgcgctgaagaaagacggcagcttctacagcaat
tcctccgtcgtatcggacgagcagtggggcaagctgcgcaaatcggtgcgcggcacgctg
cgccggatcggcgaccgtatcgcgggaggggacgtatcgatcgccccgtaccggctcggc
gggaagacgccctgccagttctgcgattacaagccggtctgccaattcgatccgctgatc
gaaggcaacgactacaacaaattgcagaagacgggcaaggacgaagtgtggacgctgttc
gccgccggcgaagaagatgaagatgcggctgacgggaacggagcgagtgaccggcagggt
caagccgggctgcaagaacagcaagaacggcaagaacagcaagaacagcaagaacagcaa
gaacagcaagaacagcaagggaaggaggcgagcgagcagtga
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integrated database retrieval system
