Papilio machaon (common yellow swallowtail): 106711073
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Entry
106711073 CDS
T05138
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03015
mRNA surveillance pathway
pmac03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106711073
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106711073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106711073
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106711073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106711073
NCBI-ProteinID:
XP_014358786
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MADGGVDIDLYADDIESDFNRQDEFGGDNVDLYDDVLAAPPAKPEDVDGPRNPSSQQHSH
PPEETNGNAPYHNSAPNHHHGRRFQLYVGNLTWWATDQDIANAVADIGVNDFQDVKFFEN
RANGQSKGFCVISLGSDQSIRMVMDRLPKKEIHGQHPVVTLPTKQALNQFESQSKTRSTP
PGPNNPGMRGPHPSGPPGPHPGATRREGCAPHGRASDAACRRASRRSFHFTPQPPGQGLP
PPHHQLPPHQAGPPRGPTPLPQHPDGFPVGVGPGAPAPHVNPAFFSQQPPGQPAPGVQPP
PQPTVPGPGAPYGHPPHGAPPPNQGPPLPGARTPYGRPPQSYGGGGEPRGGHHVAPLAHP
HAHPHPQPVISEAEFEEVMGRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIKQSK
VAHDDRCKILISSLQDTLHGVETKSYGGERRRSRSRERDARAHHRAPRRRDRSASRYRDR
SRDREDRDRYRERSRDRDRDSRYYRDYRERERERSRSRDRERADHYNRGHSREERARKSP
VEPTAESGAGDATGAKSRSAGAPYYDERYRERRERDPAPAERDRERERDHRRDARH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggcgtggatatagatttatacgctgatgatattgaatcagatttcaat
agacaggatgaatttggtggtgacaacgtagatttgtacgacgatgtgcttgctgctcca
ccggcgaagcccgaggacgttgacggccctcggaacccatcatctcagcagcattcgcat
ccaccggaagaaacgaatggcaacgctccctatcacaacagcgctccaaaccaccatcat
ggccgccgattccaactttatgttggaaacctcacatggtgggcgacagaccaagacatt
gcaaacgccgtcgcagatattggcgtgaacgatttccaagacgtcaaattcttcgagaac
agggctaacggacagtcgaagggattctgcgtaatatcgctcggttcagaccagtctata
cgaatggttatggaccgtctgccaaagaaagaaatccacggacaacacccagtcgtaact
ctgccaactaaacaggcattaaatcaatttgagagtcagtctaagactagatcgacgccg
ccgggtccaaacaatccaggaatgagaggtccacatccgagcggaccacctggcccgcat
ccgggagcgacgagacgagagggatgtgcacctcatgggcgagcctcagatgcagcgtgc
cggagggcctcgcgcaggagcttccacttcacgcctcagcccccggggcagggcctgcct
ccgccgcaccaccagctgccgcctcaccaggcgggcccgccgcgaggacccacaccgttg
ccacaacatccagatgggttcccggtgggtgtgggtccgggtgcgccggcgccgcacgtc
aaccccgccttcttcagccaacagccgcccggacagcccgctcccggcgtgcagccgccc
ccgcagcccacggtgccaggtcctggtgcaccttatggacatccacctcacggcgcgccg
ccgccgaatcaagggccgccattgcccggcgcaagaacaccgtatggaagaccaccacag
agctacggtggcggtggggagccgcgcggcgggcaccacgtggccccgctggcacacccg
cacgcgcatcctcatccgcagcccgtcatcagcgaggcggagttcgaggaggtgatgggc
cgcaaccgcaccgtctcctccagcgccatcgcgcgcgccgtcagcgacgccgccgccgga
gagtacgcctccgccattgagacgctcgtcaccgccatctcgctgatcaaacagagcaag
gtagcacacgacgaccggtgcaagatactgatatcgtcgctgcaggatacgctgcacggc
gtagagacaaagtcgtacggaggcgagcgacgccggtcgcggtcgcgggagcgcgatgct
cgcgcgcatcaccgcgccccgcgacgtcgcgaccgctctgcaagccgctaccgcgaccgc
agtcgtgaccgcgaggaccgcgacaggtatagggaacgctcgagagatcgcgacagagac
tccaggtactacagggactaccgcgagcgcgagcgcgaacgctccaggtctcgtgatagg
gaacgtgcagaccactacaataggggacatagccgcgaggaaagggcacgtaaatcccca
gtagagccgacagcggagagcggtgcgggagacgcgaccggagccaagagcaggtctgcg
ggcgcgccgtactacgacgagcgttaccgcgagcgcagggaacgcgacccggcaccggca
gaacgcgaccgcgaacgggaacgcgaccatcgccgcgacgcgcgacactag
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