Papilio machaon (common yellow swallowtail): 106719182
Help
Entry
106719182 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein haywire
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03022
Basal transcription factors
pmac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106719182
09124 Replication and repair
03420 Nucleotide excision repair
106719182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106719182
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106719182
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106719182
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106719182
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106719182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
106719182
NCBI-ProteinID:
XP_014368939
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGPPKKFKKYDSKPSSERSGKKKKVEEDITIDLVEDDNTDNVGVPVAATQDAEKNDQVPE
DEFGAKDYRNQMTLKPDNTSRPLWVAPNGHIFLEAFSPVYKHAHDFLIAIAEPVCRPQHI
HEYKLTAYSLYAAVSVGLQTTDIIEYLQRLSKCSVPAGIIEFIQLCTLSYGKVKLVLKHN
RYLVESKHVEVLQKLLKDPVIQQCRLRRDGDDDLFASAVPNKPSTTTASKSVEEKPLTND
TVPEDISQFYQQLDKDDEEDEATDLATNTAVAFEVDPDKIEVIQKRCIELEHPLLAEYDF
RNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAVCTV
RKRALVLCNSGVSVEQWKQQFKCWSTADDSMICRFTSEAKDKPMGAGILITTYNMITHGQ
RRSWEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKI
ADLNFLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEFYREYLIQKINKKMLLYVMN
PSKFRACQFLVKYHEKRGDKTIVFSDNVFALRHYAVKMNKPYIYGPTSQSERIQILQNFK
FNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGALAEEYNA
FFYTLVSQDTLEMAYSRKRQRFLVNQGYSYKVITELKGMDTEPELFYGTREEQGMLLQQV
LAASESECEEEREAGGAXGGGAGARRGAGSLASLAGADDALYLEHRRQHNKHPLFKKFRY
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaccaaagaaatttaaaaaatatgattcaaaacccagcagtgaaagatcagga
aagaaaaagaaggtggaagaggatattacaatagacttggtagaggatgataatacagat
aatgtgggagttcctgttgctgcaacacaggatgccgagaagaatgaccaggttcccgaa
gatgagtttggtgcaaaagattacaggaatcagatgacattaaaaccagacaacaccagt
cgtcctctctgggtcgccccaaatggccacatatttctggaagccttttcaccagtttat
aaacatgcacatgatttcttgattgctattgcagaacctgtttgcagacctcaacacata
catgagtacaaattaacggcctacagtttgtatgctgcagtgtcagtgggcttgcaaact
acggacattattgagtacctgcagagactgagcaaatgttctgttcccgcgggcatcatt
gagtttattcagctttgcacattatcatatggaaaagttaaacttgtattgaagcacaat
aggtatttagtagagagtaagcatgtggaggtgctgcagaaactgctgaaggacccggtg
atccagcaatgccgtctgcgacgcgacggcgacgacgacctgttcgcctccgcggtgccc
aacaagccctccaccacaacagcttctaagtccgtggaagagaaaccacttacaaatgac
acagtgccggaagacatcagccagttctaccagcagctggacaaagacgacgaggaggac
gaggccacagacttggcgacaaacaccgccgtcgcctttgaagtggatcccgataaaatt
gaggtgatacaaaagcgttgcatagagctggagcaccctctgctggctgagtacgacttc
cgcaacgacagcgtgaaccccgacatcaacatcgacctgaagcccacagccgtgcttcgc
ccctaccaggagaagagcctgcgcaagatgtttggcaacggacgagctaggtccggtgtg
atagtgttgccatgcggcgcgggcaagtcgctggtgggtgtgacggcggtgtgcacggtg
cgcaagcgcgcgctcgtcctctgcaactcgggcgtctccgtcgagcagtggaagcagcag
ttcaagtgctggtccaccgcagacgacagcatgatctgcagattcacatcggaggcgaag
gacaagccgatgggcgcgggcattctgatcacgacgtacaacatgataacgcacggccag
cggcgctcgtgggaggcggagcagaccatgaagtggctgcaggcgcaggagtggggcctg
gtggtgctggacgaggtgcacaccatccccgccaagatgttccgtcgcgtgctcaccatc
gtgcactcccacgccaagctcggtctgacggcgacgctgctgcgcgaggacgacaagatc
gcagacctgaacttcctgatcgggccgaagctgtacgaggccaactggctggagctgcag
gcggcgggctacatcgcgcgcgtgcagtgcgcagaggtctggtgccccatgacgccagag
ttctaccgcgagtacctcatacagaaaataaacaagaagatgttactgtacgtaatgaac
ccgtcaaagttccgggcgtgccagtttttggtgaagtaccacgagaagcgcggcgacaag
acgatcgtgttctcggacaatgtgttcgcgctgcgccattacgccgtcaagatgaacaag
ccgtacatctacgggccgacgtcgcagagcgagcggatacagatcctgcagaacttcaag
ttcaaccccaaagttaacacgatcttcgtgagcaaagtcgccgacaccagcttcgacctg
ccggaggccaacgtgctcatacagatctcctcacacggcggctctcgccggcaggaggcg
cagagattgggtcgtattctgcgcgcaaagaagggcgcgctggcggaggagtacaacgcg
ttcttctacacgctggtgtcacaggacacgctggagatggcctacagccgcaagagacag
cgcttcctcgtcaaccagggatacagctacaaggtcataacagagttaaagggcatggac
acggagcctgaactgttctacggcacgcgggaggagcagggcatgctgctgcagcaggtg
ttggcggcgtcagagagcgagtgcgaggaggagcgcgaggcggggggggcgngcgggggc
ggggcgggggcacgtcgcggcgccggcagtctggcctcactcgcaggcgctgacgacgct
ctctacctcgagcaccgcagacaacacaacaaacatccgctcttcaagaagttccgatat
taa
DBGET
integrated database retrieval system
