Parus major (Great Tit): 107198215 Help Entry 107198215         CDS       T04864                                  Symbol PTCH1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism pmaj  Parus major (Great Tit) Pathway pmaj04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:pmaj00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     107198215 (PTCH1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Patched Sterol-sensing Motif Other DBs NCBI-GeneID:  107198215 NCBI-ProteinID:  XP_015470511 Ensembl:  ENSPMJG00000001356 LinkDB All DBs Position Z:complement(37869779..37937086) Genome browser AA seq 1442 aa AA seqDB search MASAGNASEPETSTSAGGGGHPGRAARIGGGRRRRTGGNRSAAAPDREYLQRPSYCDAAF ALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLRAAN LETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPQEDGANVLTTEALRQHLE SALQASRVHVYMYNRQWKLEHLCYKSGELITEAGYMDQIIEYLYPCLIITPLDCFWEGAK LQSGTAYLLGKPPLQWINFDPLEFLEELKKINYQVESWEEMLNKAEVGHGYMDRPCLNPA DPDCPITAPNKNSTKPLDVALVLSGGCYGLSRKYMHWQEELIIGGTVKNSSGKLVSAQAL QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNSTQKVL SFTTTTLDDILKSFSDVSAIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVALS VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL YRREDRRLDIFCCFTSPCVTRVIQVEPQAYVENDNTCYSPPPPYSSHSFAHETQITMQST VQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSDSSIH CLEQPCTKWTLSSFAEKHYAPFLLKPKAKIVVIFLFLGLLGLSLYGTTRVRDGLDLTDIV PRETREYDFIAAQFKYFSFYNMYIVTQKADYPNVQHLLYELHRSFSNVAYVLLEEDRQLP KMWLHYFRDWLQGLQDAFDSDWETGKITYNNYKNGSDDAVLAYKLLVQTGNHAKPIDISQ LTKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRL RIPAAEPIEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYTSLGISSYPNGYPFLFWEQY IGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAV PVVILIASVGIGVEFTVHVALAFLTAIGDRNHRAVLALEHMFAPVLDGAVSTLLGVLMLA GSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGQDRLPTPSPEPA PGTVRFALPPGHTNNASDSSDSEYSSQTTVSGISEELHQYEATRGPGAPVHQVIVEATEN PLFARSTVVQPEARHQPSPRLQSNPEPSTQQPWHQGRQPKREAREGPRPPPHRPRRDAFE ISTEGHSGPSNRDRLGHKARSHSMRSPAFGAAGAAGAAYCQPITTVTASASVTVAVHPAL HSHSSRAASFPSFEGHHEAGHAPFEDPHVPFNVRCERRNSKVEVIELQDVECEERIPGNS SQ NT seq 4329 nt NT seq  +upstreamnt  +downstreamnt atggcctcggccggtaacgcgtcggagccggagaccagcaccagcgcgggcggcggaggc caccccggccgggcggcgagaatcggcggcgggaggcggcgaaggactggagggaatcgg agcgccgcggcgcccgaccgggagtatctgcagcggccaagctactgcgatgcggctttc gccttggagcagatttcaaaggggaaggcgacgggacggaaagcgccgctgtggctgcga gcaaagtttcagagactgttgtttaaactgggctgttacattcagaaaaactgcgggaag tttttggttgtcggcctcctgatatttggggctttcgctgtaggattaagggcagctaat ctcgagaccaacgtggaggagctgtgggtggaagttggtggacgagtgagtcgggagtta aattacacacggcagaagattggagaagaagccatgttcaacccccagctcatgatccag actccacaggaagatggtgctaatgtactaacaacagaagcactacgacagcaccttgag tctgcacttcaggccagcagagtacatgtctatatgtacaacagacagtggaaattggaa catttatgttacaaatcaggagaactcatcacagaagcaggttacatggaccagatcata gaatatctttatccttgcttaattatcactcctttggactgcttctgggagggagcaaag ctacaatcaggaactgcctatctattagggaagcctcctttgcagtggatcaactttgac cccttagaattcttggaagagttaaagaaaataaactaccaagtggagagctgggaagaa atgctgaataaagcagaggttggtcatggttatatggatcgaccctgcctgaatcctgct gatcctgattgcccaatcacagctcccaataaaaattccaccaaacctcttgatgtagcc cttgttttgagtggtggatgctatggactatcaaggaaatacatgcattggcaggaggag ctgattataggtggtacagtcaagaacagttctggtaaacttgtcagtgcccaggctttg caaaccatgtttcagttaatgacccctaagcaaatgtatgagcatttcaaggggtatgaa tatgtttcacatatcaactggaacgaggacaaggcagcagcaattctggaagcctggcag aggatgtatgttgaggttgttcatcaaagtgttgcacaaaactctactcagaaggtgctt tcctttacaacgaccaccctagatgacatcttgaagtcattttctgatgtcagtgctatc cgagtagctagtggctacttactaatgcttgcctatgcctgtttaacgatgctgcggtgg gactgtgccaagtctcagggtgctgtggggctggcaggagtcttgttggttgcactctct gtggctgcaggattgggcctgtgctcattgattggcatttcctttaatgctgccacaact caggttttgccttttcttgctcttggagttggtgtagatgatgttttccttctggcacat gcatttagtgaaacaggacagaataagagaattccgtttgaggacagaacaggtgaatgt ctgaagcgaacaggagcaagtgtagcccttacgtctatcagcaacgttactgctttcttt atggctgccttaattcctattccggctttaagagcattttctctccaagcagcagttgtg gtggtgttcaattttgctatggttctgctgattttccctgctatcctgagcatggacctt tatcgtcgagaagacaggagactggacatattttgctgttttacaagcccgtgtgtcacc agagtgattcaggttgagcctcaggcgtacgtggaaaatgacaatacttgctacagtcct ccacccccgtacagcagccacagttttgcacatgaaactcagattacaatgcagtccaca gtgcagttgcgcacagaatatgatcctcacacgcaggtgtactacaccacagcagagcct cgctcagaaatatctgtgcagccagtgacagtgacacaagataatctgagctgccagagc ccagaaagcacaagctcgacaagggatttactttcccagttttcagactccagtatacat tgccttgagcaaccctgtacgaagtggacactctcatcttttgcagaaaagcattatgct ccattcctcctgaaaccaaaagctaagattgtggttatttttctttttttgggtttactt gggctcagcctttatggaactacccgggtgagagatggactagatctcacagacattgta ccacgggagacacgggaatatgactttattgctgcacagttcaagtacttttcattctac aacatgtacattgtgacacagaaagcagactatccaaatgtccagcacttactttatgaa cttcacagaagtttcagcaacgtggcgtatgtcttgttggaagaggataggcagctcccc aaaatgtggttgcactactttcgagactggctgcaaggacttcaggatgcgtttgacagt gactgggaaactgggaagatcacttacaacaactataaaaatggttctgacgatgctgtt ttggcttacaaactcttggtacaaacaggcaaccatgcaaagcccattgacatcagccag ttgactaaacagcgtctggtggatgcagatggaatcattaacccaaatgctttctacatc tacctgacagcctgggttagcaacgaccctgtggcctatgctgcctcacaagccaacatc cgcccgcaccgcccggagtgggtccacgacaaagcagactacatgccagaaacgcggctg aggattccagcagccgagcccatagaatatgctcagtttcctttctacctcaatggattg cgtgaaacttctgactttgtggaggctattgagaaagtgagagctatctgtaataactac accagcctggggatctccagctacccaaatggttacccatttctgttctgggagcagtac attggacttcgtcactggctcctcttatccattagcgtggttttagcttgcacgtttctg gtgtgtgccctcttcctcctaaacccctggacagctgggatcattgtggtggtgctggct ctgatgactgtggagctgtttggcatgatgggtctgattggaataaagctgagtgcagtg cctgtggttatcctgattgcttctgttggcattggtgtggaattcactgttcacgttgct ttggcgtttttaactgccataggagacaggaaccatagggctgtgcttgcattggaacac atgtttgcaccagtgctggatggggccgtgtccactctgcttggggtgttaatgcttgca ggatcagagtttgattttattgtcaggtatttctttgctgttttggcaatcctaaccatt ctgggagttctcaatggattggtgctgcttcctgttcttctctcattctttggaccatac cctgaggtatctccagccaacggacaggacagattgcccacaccatctcctgagccagcc cccggtactgtgaggtttgcactgccacctggccacacaaataatgcttcggattcctct gattctgagtacagctctcaaaccacagtgtctggcatcagtgaagagctgcatcagtat gaggccacacgaggccctggggcaccagtccaccaagtaatagtggaagcgactgagaat cctctcttcgcaagatccactgtggttcagccggaagcaaggcaccagccgagtcctagg ctgcagtcgaatccggagcccagcacgcagcagccgtggcatcagggcagacagcccaaa agggaagcgagggaagggccgcgaccacctcctcaccgccctcgcagggacgcttttgaa atttctaccgaagggcactcgggacccagcaacagggatcgcttgggccacaaggctcgt tcccacagcatgagaagcccggcattcggggcggcgggcgctgcgggagcagcctactgc cagcctatcaccactgtgactgcctcggcctcggtcactgttgctgtccaccctgccctg cacagccacagctcccgggcagcgagcttcccatccttcgagggacaccacgaagctggc cacgcgccgtttgaggacccccatgtgccttttaatgtgaggtgtgaaagaagaaattct aaagtagaagtaatagaactgcaagatgttgaatgtgaggaaaggatacctggcaacagc tcacaataa

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