KEGG   Parus major (Great Tit): 107202331Help
Entry
107202331         CDS       T04864                                 

Gene name
HDAC2
Definition
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04110  Cell cycle
pmaj04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 Environmental Information Processing
  Signal transduction
   04330 Notch signaling pathway
    107202331 (HDAC2)
 Cellular Processes
  Cell growth and death
   04110 Cell cycle
    107202331 (HDAC2)
Enzymes [BR:pmaj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107202331 (HDAC2)
Chromosome and associated proteins [BR:pmaj03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107202331 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     107202331 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107202331 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    107202331 (HDAC2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 107202331
NCBI-ProteinID: XP_015478454
LinkDB All DBs
Position
3
AA seq 488 aa AA seqDB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKAKDSSGEKTDAKGA
KSEQLSNP
NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactattacgacggtgatatt
ggaaactattactatggacaaggacatccaatgaaacctcacaggatccgaatgactcac
aacttgctgctaaactatggcttatacagaaaaatggaaatttatcgaccccacaaagca
actgccgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctatttgagttttgtcagctgtcaactggaggctctgttgct
ggggcagtaaaattgaacagacaacaaacagacatggctgtcaattgggctgggggactt
caccatgccaagaaatcggaggcatctggtttctgttatgtcaatgatattgtgcttgcc
atccttgagttactgaaatatcaccaaagagtgttgtatattgatatcgatatccatcat
ggtgacggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccaggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatctaaagtaatggagatgtaccagcccagtgctgtggtattg
cagtgtggagcagattcactgtctggggacagactgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggagggggctacacaattcgtaatgtggctcggtgctggacatatgaaactgctgttgcc
ttagattgtgaaattcccaatgagttgccatacaatgactactttgagtattttggacca
gacttcaagcttcacattagtccttcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttatttgagaacttgcgcatgttacctcacgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcctctgataagcgcatagcctgtgacgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccagaatagaagaagacaaaaaagagactgaggacaaaaaagcagat
gttaaggaggaggataaagccaaggacagcagtggtgaaaagacagacgccaaaggagca
aaatcagagcagctcagcaacccttga

DBGET integrated database retrieval system