Parus major (Great Tit): 107205450
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Entry
107205450 CDS
T04864
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03320
PPAR signaling pathway
pmaj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107205450 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
107205450 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107205450 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmaj03310
]
107205450 (NR1H3)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107205450 (NR1H3)
Nuclear receptors [BR:
pmaj03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
107205450 (NR1H3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
107205450
NCBI-ProteinID:
XP_015485263
Ensembl:
ENSPMJG00000012279
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Position
5:complement(22981660..23012363)
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AA seq
409 aa
AA seq
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MGPTQLSTQDHGKRVASVFEMEEEGLPLFPGSDNPPEHAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYACKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIRLKKLKKQEDDQARTVVVRPNPPNPPSPSHKLTPEQLSMIKKLV
AAQQQCNQRSFTDRLKVTPWPQIPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccactcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaggaagggctcccgctcttccctggctcagataacccccctgagcatgcagaa
aatccccccttgaagcggaagaagggcccagcccctaagatgctgggaaatgaagtgtgc
agcgtgtgtggggacaaggcctccggcttccactacaacgtgctgagctgcgaaggctgc
aagggcttcttccgccgcagcgtcatcaagggcgcacagtacgcctgcaagaacggcggc
aagtgcgagatggacatgtacatgcgccgcaagtgccaggagtgccggctgcgcaagtgc
caggaggccggcatgcgggagcagtatgttctgtctgaagaacagatccgactgaagaaa
ctgaagaagcaggaagatgatcaggctcggacagttgtggtgcgtccgaaccctccaaat
ccgccaagcccttcccacaaactgacgccggaacagctgagcatgataaaaaagctcgtg
gctgctcagcagcagtgcaaccagcgctccttcacagacagactcaaagtgacgccatgg
ccccagattcctgatccaaataaccgtgaagcaaggcagcagcgttttgctcacttcaca
gaacttgcaattatctctgtgcaagagatagtggactttgccaagcaattacctggcttc
ctggagctcaccagggaagatcagatcgctttactgaagacatctaccatagaggtgatg
ttgttggagacatctcggcgctacaatccagagattgagagtatcacctttcttaaggac
ctgagctataatcgggatgacttcgccaaagcaggtctgcagtttgagttcattaacccc
atctttgagttctcaaagggaatgaatgagctacagcttaatgatgctgaatatgcactt
ttaattgccatcaacattttctctgcagaccgaccgaatgtgcaggaccagtccctggta
gagaggctgcagcacacctatgtggaagcgcttcattcttacatttgcatcaacagacca
aatgaccgcttgatgtttccacggatgttaatgaagctggtcagtcttcggacactgagc
agtgtccactctgaacaggtgtttgcccttcggctgcaggacaagaaactcccgcccttg
ctctcagaaatctgggatgtgcatgagtga
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