Parus major (Great Tit): 107206676
Help
Entry
107206676 CDS
T04864
Symbol
OPN4
Name
(RefSeq) melanopsin
KO
K04255
r-opsin
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pmaj04030
]
107206676 (OPN4)
G protein-coupled receptors [BR:
pmaj04030
]
Rhodopsin family
Vision
Opsin
107206676 (OPN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
DUF6249
Motif
Other DBs
NCBI-GeneID:
107206676
NCBI-ProteinID:
XP_015488142
Ensembl:
ENSPMJG00000015437
LinkDB
All DBs
Position
6:7391998..7413802
Genome browser
AA seq
561 aa
AA seq
DB search
MEFEFTLTFFVCCLFVFLTIFPSREAHASLFRKVWHTYDLLFAPQKMTVQDVPRAFPTVD
VPDHAHYTIGVVILIVGITGTLGNFLVFYAFCRSRSLQTPANILIINLAISDFLMSITQS
PVFFTSSLYKHWIFGEKGCELYAFCGALFGITSMITLTVIALDRYFVITKPLASVGVTSK
KKALIILVGVWLYSLAWSLPPFFGWSAYVPEGLLTSCSWDYMTFTPSVRAYTMLLFCFVF
FIPLIAIIYSYVSIFEAIKKANKSIQTFGCKRGNKEFQKQYQRMKNEWKMAKIALIVILF
FVISWSPYSIVALVAFAGYSHVLTPLMNSIPAVIAKASVIHNPIIYAITHPKYRRAIATY
VPCLGPLLRVSPKDSRSFSSYHSSRRATVTSQSSEISGLQKGKRRLSSLSDSESGCTETE
TDTPSMFSRLARRQISYETEKDTTQATDIRAKLTSQDSGNCGKTAVDADDILMVELNVTE
YTATPTQSSKTCSLEEIKKSQSLNSIGQRKGESHQGSSSAQIPSITITCSSVQGVELPSR
YNSDFLYPKSISHKQNKKSSS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgaatttactctgactttttttgtttgttgcctttttgtattcttgaccatt
ttcccttctagagaagcacatgccagcttattcagaaaagtttggcatacctatgacctc
ttatttgctccacagaagatgacagtgcaagatgttcctcgtgcctttcccacagtggat
gtcccagatcatgcccattatacaattggagttgtcattcttatagtggggattacagga
actctgggtaatttcctggtcttctatgctttctgcaggagtaggagccttcagacccca
gccaacatactcatcatcaatctagctattagtgacttcctgatgtccattacacagtct
ccagtttttttcaccagcagcctctacaaacactggatttttggcgagaaaggctgtgag
ctgtatgccttctgcggagctctttttggcattacatctatgatcactttgacggtgatt
gccttggacagatattttgtcatcactaaacctctggcttctgttggagtgacgtcaaag
aagaaggccctaataatcctagtaggagtctggctgtactctttggcttggagtctccca
cccttctttggatggagtgcgtatgttcctgagggtttgctgacttcctgttcctgggac
tacatgactttcacaccatcagtccgtgcctacacaatgctgcttttctgctttgtcttt
ttcattcctttgattgctatcatatacagctatgtctctatctttgaggctatcaagaag
gccaacaagtctattcaaacatttggatgcaaacgtggaaataaagagttccagaaacag
tatcagaggatgaaaaatgaatggaagatggccaaaattgcactgattgtcatcttgttt
tttgtcatttcctggtcaccatactctattgttgctctggtagcttttgctgggtattcc
catgtcctaacacctttaatgaactccataccagctgtgattgccaaagcttctgtcatc
cataaccccatcatttatgccatcactcaccccaaatacagaagagccattgcaacatat
gttccttgccttggacccctactgagagtttctcctaaagactcacggtccttcagcagt
taccactcctccagacgagcgaccgtaaccagccagtcttctgagataagtgggctgcag
aaaggaaaaaggagattgtcttctctctctgacagtgaatcaggctgtactgaaacagaa
accgatactcccagtatgttctccagacttgccagaagacaaatttcctatgaaacagag
aaagacacaactcaggctaccgacataagagccaaactgacaagccaggattctgggaat
tgtgggaagacagctgtagatgctgatgacatattgatggtggaactgaatgtcacagag
tacacggctacacctactcaatcatctaaaacatgcagcttggaggaaatcaagaaaagt
cagagcctgaacagtattggacaaagaaaaggagagtctcaccagggatcatcttcagcc
cagatacccagtattacaataacatgcagcagtgtccaaggagtagagctgccttctaga
tacaactctgatttcctgtaccctaaatccatcagtcacaagcagaacaagaagtccagc
agttga
DBGET
integrated database retrieval system