KEGG   Parus major (Great Tit): 107207466Help
Entry
107207466         CDS       T04864                                 

Gene name
HDAC4
Definition
(RefSeq) histone deacetylase 4 isoform X3
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    107207466 (HDAC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmaj03036]
    107207466 (HDAC4)
Enzymes [BR:pmaj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107207466 (HDAC4)
Chromosome and associated proteins [BR:pmaj03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     107207466 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 107207466
NCBI-ProteinID: XP_015490087
LinkDB All DBs
Position
7
AA seq 1091 aa AA seqDB search
MLEEEQQNLDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAPSSVPMDLRLDHQFS
MPVTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEM
LAMKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEF
VLNKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDD
FPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTGTADSACNSA
PGSGPSSPNNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNIT
LGLPATGPSSAGQAQQDAERLAIPALQQRISLFPGTHLTPYLSTTTLERDGGTAHNPLLQ
HMVLLEQPTAQTPLVTDWYLSGLPLHAQPLVGGERVSPSIHKLRQHRPLGRTQSAPLPQN
AQALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPAEPARQHESHPEETEEELREHQ
ALLEEPYGDRAAGQKEPPALASVVQVKQEPIESDEEEAEPQQELESGQRQAEQELLFRQQ
ALLLEQQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFT
TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT
VHSEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARL
AVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK
ILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMA
FTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF
GYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQQRANANA
VHSMEKVIEIHSKYWHSLQRFASTVGYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRP
EDEPMEEEPPL
NT seq 3276 nt NT seq  +upstreamnt  +downstreamnt
atgcttgaagaagagcagcaaaatttggatgggctttctggcagagaccagccagtggag
ctgttgaatccacctcgagtgaaccacatgcccagctctgttgacgtgagcacagccctg
cccttgcaagtggcgccgagctcggtgcccatggacctgcggctggaccaccagttctcc
atgccggtgacggagcccacgctgcgggagcagcagctgcagcaggagctgctggccctc
aagcagaagcagcagatccagaggcagatcctgattgcagagttccagcggcagcacgag
cagctttcccggcagcacgaggcgcagctgcacgagcacatcaagcagcagcaggagatg
ctggccatgaagcatcagcaggagctgttggagcaccagaggaagttggagcagcaccga
caggagcaggagctggagaagcagcaccgagagcagaaactgcagcagctgaaaaacaaa
gagaaagggaaagagagtgcagtggcaagcacagaagtgaagatgaagttgcaggaattt
gtgttaaacaagaagaaggctctggcccaccggaatctcaaccactgcatatccagcgac
cctcgcttctggtacgggaagactcagcacagctctctggaccagagctccccaccccaa
agcggcgtctccggcacctacaaccacccggtcctggggatgtacgattccaaagacgac
ttcccactcagaaaaacagcctctgaacccaacctgaagctgcgctccagactaaagcag
aaggtggcagagaggaggagcagccccctcctgcgcaggaaggacgggcctgtggtgacg
gcgctcaagaagcgcccgctggatgtcacaggtactgcggactctgcatgcaacagtgct
cctggatctggtcccagctctccaaacaacagctccaacaacatcagcactgagaacgga
atcgcaggatcagtcacgagtatccaagcagagaccagcctggctcacaggctcgtgaac
cgcgagggctccgtgacgcagctcccgctctacacctcaccctccctgcccaacatcacg
ctaggactgcctgccaccggcccctccagcgcgggacaagcacagcaggacgcagagagg
ctcgcaatcccagccttacagcagcggatctctttattccctggcactcacctcactccc
tacctgagcactacaacgttggagagggatgggggaactgcacacaaccctctcctgcag
cacatggtcctactggaacagccaactgcacaaacacccctggtcacagactggtatctt
tcaggactgcccctgcacgcacagcccctggtgggtggagagagggtctccccttcgatc
cacaagctgcggcagcaccgcccgctcgggcgcacccagtctgctcccctgccccagaac
gcccaggccctccagcagctggtgatccagcagcagcaccagcaattcctggagaaacac
aaacagcaattccagcagcagcagctgcacatcaacaagatcatctccaagcccgcggag
ccggcgcggcagcacgagagccaccccgaggagacggaggaggagctgcgggagcaccag
gccctgctggaggagccctacggcgacagggccgcgggccagaaggagcccccggcgctg
gccagcgtggtgcaggtcaagcaggagcccatcgagagcgatgaggaggaggcagagccg
cagcaggagctggagtccgggcagaggcaggcggagcaggagctgctcttccgccagcaa
gccctgctcctggagcagcagcggattcaccagctgaggaactaccaggcgtcactggag
gccgctggcatgcccgtgtccttcgggggacaccggcccctgtcccgggcacagtcctcc
cctgcctcagccaccttccccatgtctgtgcaggagccacccactaagccaaggttcaca
acaggccttgtgtacgacacattgatgctgaagcaccagtgcacctgtggaaacaccaac
agccaccccgagcacgcgggcaggatccagagcatctggtccaggctccaggagacgggg
ctgcggggcaagtgtgagtgcatccgtggcagaaaggcaacgctggaagagctgcagacg
gttcactcggaagcccacacgctgctttatggcacaaaccctctgaacaggcagaaactg
gacagcaagaagcttctaggttccctaacgtcgatgtttgtcaggctgccttgcggtggt
gtcggggttgacagtgacaccatttggaacgaggtgcactcgtctggcgccgctcgcctg
gccgtgggctgtgtcatcgagctggtgttcaaagtggccacaggagaactgaagaatgga
tttgctgttgtccggcccccgggccaccacgcggaggagagcacacccatgggtttctgc
tattttaactctgtggcgattgcagccaagctgctccagcaaaggctcaatgtgagcaaa
atcctcatcgtggactgggatgtccaccatgggaatggtactcagcaggccttctacaac
gatcccaacgtcctttatatctcactacaccgctatgatgatggcaacttcttcccaggc
agcggtgctccagatgaggttggcacaggagcaggagttggtttcaatgttaacatggca
tttactggtggcctggatccgcccatgggagacacggaatatttaactgccttcaggaca
gtagtgatgcccattgccaacgagtttgccccagacgttgtgctggtgtcatctggtttc
gatgctgtggaagggcaccccacacccctcggaggatacaatctgtcagcaaaatgcttc
gggtacctgacgaagcagctgatgggcctggccgggggccgcgtcgtgctggccctggag
ggtggccacgacctcacggccatctgcgatgcctcggaggcttgtgtgtcagccctgctg
ggaaacgagcttgaccctcttccggagaaggttttccagcagagagcaaacgctaatgcg
gtgcattccatggagaaagtcattgagatccacagcaaatactggcattccctccagcgt
ttcgcctccacggtgggatattccctggtggaggcccagaagtgtgagaatgaggaggcg
gagacggtgacggccatggcatcactgtcagtgggcgtgaagccggcggagaagagacct
gaggacgaacccatggaagaggagcctccactgtag

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